Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPL13AP40429 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
RPL13AP40429 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPL13AP40429 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPL13AP40429 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
RPL13AP40429 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL13AP40429 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPL13AP40429 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RPL13AP40429 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.97□□□□□ -0.01
RPL13AP40429 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL13AP40429 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL13AP40429 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL13AP40429 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RPL13AP40429 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPL13AP40429 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPL13AP40429 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL13AP40429 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL13AP40429 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL13AP40429 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL13AP40429 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPL13AP40429 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RPL13AP40429 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
RPL13AP40429 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RPL13AP40429 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RPL13AP40429 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 CEP120-209ENST00000515110 606 ntTSL 3 BASIC14.96□□□□□ -0.01
RPL13AP40429 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.96□□□□□ -0.01
RPL13AP40429 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RPL13AP40429 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
RPL13AP40429 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RPL13AP40429 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RPL13AP40429 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL13AP40429 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL13AP40429 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL13AP40429 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPL13AP40429 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPL13AP40429 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC14.95□□□□□ -0.02
RPL13AP40429 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPL13AP40429 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RPL13AP40429 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RPL13AP40429 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RPL13AP40429 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RPL13AP40429 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL13AP40429 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL13AP40429 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL13AP40429 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL13AP40429 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPL13AP40429 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL13AP40429 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPL13AP40429 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPL13AP40429 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL13AP40429 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL13AP40429 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL13AP40429 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.94□□□□□ -0.02
RPL13AP40429 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RPL13AP40429 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.94□□□□□ -0.02
RPL13AP40429 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RPL13AP40429 GPX1-201ENST00000419349 1106 ntBASIC14.94□□□□□ -0.02
RPL13AP40429 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.94□□□□□ -0.02
RPL13AP40429 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
RPL13AP40429 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL13AP40429 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL13AP40429 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL13AP40429 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RPL13AP40429 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPL13AP40429 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL13AP40429 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RPL13AP40429 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL13AP40429 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RPL13AP40429 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL13AP40429 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPL13AP40429 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RPL13AP40429 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL13AP40429 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPL13AP40429 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC14.93□□□□□ -0.02
RPL13AP40429 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RPL13AP40429 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL13AP40429 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RPL13AP40429 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPL13AP40429 AC022413.1-201ENST00000624602 984 ntBASIC14.93□□□□□ -0.02
RPL13AP40429 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RPL13AP40429 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RPL13AP40429 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPL13AP40429 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPL13AP40429 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms