Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 CTR1YPR124W 1221 nt3.52□□□□□ -1.85
TDA11P38854 MIT1YEL007W 2001 nt3.52□□□□□ -1.85
TDA11P38854 MIG3YER028C 1185 nt3.51□□□□□ -1.85
TDA11P38854 RAI1YGL246C 1164 nt3.51□□□□□ -1.85
TDA11P38854 RPS0AYGR214W 759 nt3.51□□□□□ -1.85
TDA11P38854 COS8YHL048W 1146 nt3.51□□□□□ -1.85
TDA11P38854 SPO16YHR153C 597 nt3.51□□□□□ -1.85
TDA11P38854 COQ5YML110C 924 nt3.51□□□□□ -1.85
TDA11P38854 GIS2YNL255C 462 nt3.51□□□□□ -1.85
TDA11P38854 YOL050CYOL050C 321 nt3.51□□□□□ -1.85
TDA11P38854 SPS4YOR313C 1017 nt3.51□□□□□ -1.85
TDA11P38854 YBR103C-AYBR103C-A 144 nt3.51□□□□□ -1.85
TDA11P38854 CDC45YLR103C 1953 nt3.51□□□□□ -1.85
TDA11P38854 TAF6YGL112C 1551 nt3.51□□□□□ -1.85
TDA11P38854 APL4YPR029C 2499 nt3.5□□□□□ -1.85
TDA11P38854 RRP5YMR229C 5190 nt3.5□□□□□ -1.85
TDA11P38854 IES6YEL044W 501 nt3.5□□□□□ -1.85
TDA11P38854 SGN1YIR001C 753 nt3.5□□□□□ -1.85
TDA11P38854 YAL064W-BYAL064W-B 381 nt3.5□□□□□ -1.85
TDA11P38854 PUB1YNL016W 1362 nt3.5□□□□□ -1.85
TDA11P38854 HMS1YOR032C 1305 nt3.49□□□□□ -1.85
TDA11P38854 CLB5YPR120C 1308 nt3.49□□□□□ -1.85
TDA11P38854 GEM1YAL048C 1989 nt3.49□□□□□ -1.85
TDA11P38854 HPR1YDR138W 2259 nt3.49□□□□□ -1.85
TDA11P38854 FMC1YIL098C 468 nt3.49□□□□□ -1.85
TDA11P38854 RPS21AYKR057W 264 nt3.49□□□□□ -1.85
TDA11P38854 RUF21RUF21 707 nt3.49□□□□□ -1.85
TDA11P38854 SIL1YOL031C 1266 nt3.49□□□□□ -1.85
TDA11P38854 PEP7YDR323C 1548 nt3.49□□□□□ -1.85
TDA11P38854 CWH43YCR017C 2862 nt3.48□□□□□ -1.85
TDA11P38854 SPT16YGL207W 3108 nt3.48□□□□□ -1.85
TDA11P38854 GLC3YEL011W 2115 nt3.48□□□□□ -1.85
TDA11P38854 CDC73YLR418C 1182 nt3.48□□□□□ -1.85
TDA11P38854 YOR186WYOR186W 435 nt3.48□□□□□ -1.85
TDA11P38854 FDH2YPL275W 711 nt3.48□□□□□ -1.85
TDA11P38854 CHA4YLR098C 1947 nt3.48□□□□□ -1.85
TDA11P38854 TCB3YML072C 4638 nt3.48□□□□□ -1.85
TDA11P38854 MNR2YKL064W 2910 nt3.47□□□□□ -1.85
TDA11P38854 YRM1YOR172W 2361 nt3.47□□□□□ -1.85
TDA11P38854 PRP3YDR473C 1410 nt3.47□□□□□ -1.85
TDA11P38854 REB1YBR049C 2433 nt3.47□□□□□ -1.85
TDA11P38854 RPC11YDR045C 333 nt3.47□□□□□ -1.85
TDA11P38854 FMP10YER182W 735 nt3.47□□□□□ -1.85
TDA11P38854 PEX21YGR239C 867 nt3.47□□□□□ -1.85
TDA11P38854 YJL028WYJL028W 336 nt3.47□□□□□ -1.85
TDA11P38854 TIF34YMR146C 1044 nt3.47□□□□□ -1.85
TDA11P38854 BMT2YBR141C 1014 nt3.47□□□□□ -1.85
TDA11P38854 DER1YBR201W 636 nt3.47□□□□□ -1.85
TDA11P38854 COP1YDL145C 3606 nt3.46□□□□□ -1.85
TDA11P38854 EMC1YCL045C 2283 nt3.46□□□□□ -1.85
TDA11P38854 FLO10YKR102W 3510 nt3.46□□□□□ -1.86
TDA11P38854 YMR018WYMR018W 1545 nt3.46□□□□□ -1.86
TDA11P38854 TRP4YDR354W 1143 nt3.46□□□□□ -1.86
TDA11P38854 VFA1YER128W 612 nt3.46□□□□□ -1.86
TDA11P38854 YUH1YJR099W 711 nt3.46□□□□□ -1.86
TDA11P38854 RHO5YNL180C 996 nt3.46□□□□□ -1.86
TDA11P38854 POC4YPL144W 447 nt3.46□□□□□ -1.86
TDA11P38854 MGA1YGR249W 1371 nt3.46□□□□□ -1.86
TDA11P38854 YOL075CYOL075C 3885 nt3.46□□□□□ -1.86
TDA11P38854 BUD6YLR319C 2367 nt3.46□□□□□ -1.86
TDA11P38854 RAD7YJR052W 1698 nt3.46□□□□□ -1.86
TDA11P38854 PPQ1YPL179W 1650 nt3.46□□□□□ -1.86
TDA11P38854 TDA1YMR291W 1761 nt3.46□□□□□ -1.86
TDA11P38854 LOS1YKL205W 3303 nt3.45□□□□□ -1.86
TDA11P38854 MSD1YPL104W 1977 nt3.45□□□□□ -1.86
TDA11P38854 PEX1YKL197C 3132 nt3.45□□□□□ -1.86
TDA11P38854 AUS1YOR011W 4185 nt3.45□□□□□ -1.86
TDA11P38854 RRN6YBL014C 2685 nt3.45□□□□□ -1.86
TDA11P38854 MCM21YDR318W 1107 nt3.45□□□□□ -1.86
TDA11P38854 YDR431WYDR431W 312 nt3.45□□□□□ -1.86
TDA11P38854 ERV29YGR284C 933 nt3.45□□□□□ -1.86
TDA11P38854 ARG80YMR042W 534 nt3.45□□□□□ -1.86
TDA11P38854 TRI1YMR233W 681 nt3.45□□□□□ -1.86
TDA11P38854 TMA16YOR252W 537 nt3.45□□□□□ -1.86
TDA11P38854 TDA3YHR009C 1572 nt3.45□□□□□ -1.86
TDA11P38854 ORC4YPR162C 1590 nt3.45□□□□□ -1.86
TDA11P38854 GAT2YMR136W 1683 nt3.45□□□□□ -1.86
TDA11P38854 VTC4YJL012C 2166 nt3.44□□□□□ -1.86
TDA11P38854 MSS2YDL107W 1056 nt3.44□□□□□ -1.86
TDA11P38854 OTU1YFL044C 906 nt3.44□□□□□ -1.86
TDA11P38854 GTF1YGR102C 552 nt3.44□□□□□ -1.86
TDA11P38854 CIR1YGR207C 786 nt3.44□□□□□ -1.86
TDA11P38854 DLS1YJL065C 504 nt3.44□□□□□ -1.86
TDA11P38854 MOH1YBL049W 417 nt3.44□□□□□ -1.86
TDA11P38854 VPS28YPL065W 729 nt3.44□□□□□ -1.86
TDA11P38854 YPL071CYPL071C 471 nt3.44□□□□□ -1.86
TDA11P38854 REG2YBR050C 1017 nt3.44□□□□□ -1.86
TDA11P38854 MDN1YLR106C 14733 nt3.43□□□□□ -1.86
TDA11P38854 QRI7YDL104C 1224 nt3.43□□□□□ -1.86
TDA11P38854 YDR161WYDR161W 1164 nt3.43□□□□□ -1.86
TDA11P38854 YDR271CYDR271C 372 nt3.43□□□□□ -1.86
TDA11P38854 NSE3YDR288W 912 nt3.43□□□□□ -1.86
TDA11P38854 HAT2YEL056W 1206 nt3.43□□□□□ -1.86
TDA11P38854 YER039C-AYER039C-A 219 nt3.43□□□□□ -1.86
TDA11P38854 YGR126WYGR126W 693 nt3.43□□□□□ -1.86
TDA11P38854 YGR219WYGR219W 342 nt3.43□□□□□ -1.86
TDA11P38854 HMX1YLR205C 954 nt3.43□□□□□ -1.86
TDA11P38854 POF1YCL047C 777 nt3.43□□□□□ -1.86
TDA11P38854 THR4YCR053W 1545 nt3.43□□□□□ -1.86
TDA11P38854 RDS1YCR106W 2499 nt3.43□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms