Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC006455.2-201ENST00000429931 906 ntBASIC20.2■□□□□ 0.82
CHMP24386 DUX4L4-201ENST00000566884 1269 ntBASIC20.2■□□□□ 0.82
CHMP24386 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.2■□□□□ 0.82
CHMP24386 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP24386 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP24386 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP24386 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP24386 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP24386 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP24386 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP24386 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP24386 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP24386 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CHMP24386 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP24386 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CHMP24386 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP24386 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP24386 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP24386 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP24386 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CHMP24386 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP24386 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.18■□□□□ 0.82
CHMP24386 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP24386 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.18■□□□□ 0.82
CHMP24386 MIR3181-201ENST00000578512 73 ntBASIC20.18■□□□□ 0.82
CHMP24386 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP24386 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.18■□□□□ 0.82
CHMP24386 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CHMP24386 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.17■□□□□ 0.82
CHMP24386 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CHMP24386 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP24386 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP24386 LINC01529-204ENST00000636474 1715 ntBASIC20.17■□□□□ 0.82
CHMP24386 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP24386 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP24386 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.17■□□□□ 0.82
CHMP24386 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.17■□□□□ 0.82
CHMP24386 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.17■□□□□ 0.82
CHMP24386 AL355001.2-201ENST00000620617 1191 ntBASIC20.17■□□□□ 0.82
CHMP24386 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.17■□□□□ 0.82
CHMP24386 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.17■□□□□ 0.82
CHMP24386 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP24386 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CHMP24386 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.16■□□□□ 0.82
CHMP24386 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP24386 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP24386 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP24386 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CHMP24386 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP24386 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CHMP24386 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP24386 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP24386 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CHMP24386 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP24386 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.16■□□□□ 0.82
CHMP24386 AC136469.2-201ENST00000623944 1028 ntBASIC20.16■□□□□ 0.82
CHMP24386 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP24386 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CHMP24386 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP24386 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP24386 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CHMP24386 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP24386 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.15■□□□□ 0.82
CHMP24386 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.15■□□□□ 0.82
CHMP24386 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.15■□□□□ 0.82
CHMP24386 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.15■□□□□ 0.82
CHMP24386 pRNA.6-201ENST00000610482 90 ntBASIC20.15■□□□□ 0.82
CHMP24386 pRNA.5-201ENST00000612139 90 ntBASIC20.15■□□□□ 0.82
CHMP24386 pRNA.11-201ENST00000618423 90 ntBASIC20.15■□□□□ 0.82
CHMP24386 pRNA.13-201ENST00000619112 90 ntBASIC20.15■□□□□ 0.82
CHMP24386 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP24386 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.15■□□□□ 0.82
CHMP24386 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP24386 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.15■□□□□ 0.82
CHMP24386 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
CHMP24386 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHMP24386 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CHMP24386 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CHMP24386 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP24386 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CHMP24386 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.14■□□□□ 0.81
CHMP24386 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
CHMP24386 MIR4767-201ENST00000582827 78 ntBASIC20.14■□□□□ 0.81
CHMP24386 AL499627.2-201ENST00000606283 725 ntBASIC20.14■□□□□ 0.81
CHMP24386 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP24386 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP24386 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.13■□□□□ 0.81
CHMP24386 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.13■□□□□ 0.81
CHMP24386 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.13■□□□□ 0.81
CHMP24386 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP24386 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP24386 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.13■□□□□ 0.81
CHMP24386 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP24386 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP24386 AC142381.2-201ENST00000566120 298 ntBASIC20.13■□□□□ 0.81
CHMP24386 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP24386 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CHMP24386 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP24386 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
CHMP24386 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms