Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHGAP10645 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHGAP10645 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
CHGAP10645 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC31.42■■■□□ 2.62
CHGAP10645 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC31.42■■■□□ 2.62
CHGAP10645 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
CHGAP10645 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC31.41■■■□□ 2.62
CHGAP10645 AC007322.1-201ENST00000426983 750 ntBASIC31.41■■■□□ 2.62
CHGAP10645 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CHGAP10645 AC005181.1-201ENST00000604782 1256 ntBASIC31.41■■■□□ 2.62
CHGAP10645 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHGAP10645 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHGAP10645 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHGAP10645 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CHGAP10645 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC31.4■■■□□ 2.62
CHGAP10645 TSPY20P-201ENST00000450910 630 ntBASIC31.4■■■□□ 2.62
CHGAP10645 AC142086.2-201ENST00000569753 217 ntBASIC31.4■■■□□ 2.62
CHGAP10645 AC231657.2-201ENST00000624556 255 ntBASIC31.4■■■□□ 2.62
CHGAP10645 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC31.4■■■□□ 2.62
CHGAP10645 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
CHGAP10645 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHGAP10645 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
CHGAP10645 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
CHGAP10645 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
CHGAP10645 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC31.39■■■□□ 2.62
CHGAP10645 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHGAP10645 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CHGAP10645 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHGAP10645 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC31.39■■■□□ 2.62
CHGAP10645 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHGAP10645 TSPY6P-201ENST00000448518 926 ntBASIC31.39■■■□□ 2.62
CHGAP10645 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CHGAP10645 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC31.39■■■□□ 2.62
CHGAP10645 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHGAP10645 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC31.38■■■□□ 2.61
CHGAP10645 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHGAP10645 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC31.38■■■□□ 2.61
CHGAP10645 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHGAP10645 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
CHGAP10645 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC31.38■■■□□ 2.61
CHGAP10645 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CHGAP10645 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHGAP10645 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHGAP10645 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHGAP10645 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHGAP10645 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CHGAP10645 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
CHGAP10645 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC31.37■■■□□ 2.61
CHGAP10645 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHGAP10645 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CHGAP10645 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
CHGAP10645 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC31.37■■■□□ 2.61
CHGAP10645 AL138781.1-201ENST00000566567 1274 ntBASIC31.37■■■□□ 2.61
CHGAP10645 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC31.37■■■□□ 2.61
CHGAP10645 AP001160.3-201ENST00000601484 763 ntBASIC31.37■■■□□ 2.61
CHGAP10645 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC31.37■■■□□ 2.61
CHGAP10645 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHGAP10645 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC31.37■■■□□ 2.61
CHGAP10645 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CHGAP10645 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
CHGAP10645 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC31.36■■■□□ 2.61
CHGAP10645 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHGAP10645 METTL15-202ENST00000403099 795 ntTSL 5 BASIC31.36■■■□□ 2.61
CHGAP10645 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC31.36■■■□□ 2.61
CHGAP10645 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHGAP10645 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC31.36■■■□□ 2.61
CHGAP10645 KLF13-207ENST00000560473 489 ntTSL 3 BASIC31.36■■■□□ 2.61
CHGAP10645 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CHGAP10645 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHGAP10645 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
CHGAP10645 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
CHGAP10645 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CHGAP10645 GUSBP6-202ENST00000438529 1198 ntBASIC31.35■■■□□ 2.61
CHGAP10645 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31.35■■■□□ 2.61
CHGAP10645 BRI3-207ENST00000539286 699 ntTSL 2 BASIC31.35■■■□□ 2.61
CHGAP10645 MYCNOS-205ENST00000641950 531 ntBASIC31.35■■■□□ 2.61
CHGAP10645 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC31.35■■■□□ 2.61
CHGAP10645 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
CHGAP10645 DUSP8P5-201ENST00000422884 1815 ntBASIC31.35■■■□□ 2.61
CHGAP10645 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC31.34■■■□□ 2.61
CHGAP10645 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CHGAP10645 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC31.34■■■□□ 2.61
CHGAP10645 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
CHGAP10645 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC31.34■■■□□ 2.61
CHGAP10645 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CHGAP10645 SLC7A5P2-201ENST00000553010 536 ntBASIC31.34■■■□□ 2.61
CHGAP10645 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC31.34■■■□□ 2.61
CHGAP10645 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC31.34■■■□□ 2.61
CHGAP10645 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHGAP10645 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHGAP10645 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC31.34■■■□□ 2.61
CHGAP10645 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CHGAP10645 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHGAP10645 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC31.33■■■□□ 2.61
CHGAP10645 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
CHGAP10645 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHGAP10645 SERP1-208ENST00000491660 830 ntTSL 2 BASIC31.33■■■□□ 2.61
CHGAP10645 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC31.33■■■□□ 2.61
CHGAP10645 TFG-210ENST00000620299 1289 ntTSL 5 BASIC31.33■■■□□ 2.61
CHGAP10645 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC31.33■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms