Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC139530.1-201ENST00000575312 1977 ntBASIC19.08■□□□□ 0.64
APOC1P02654 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.08■□□□□ 0.64
APOC1P02654 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
APOC1P02654 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.07■□□□□ 0.64
APOC1P02654 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
APOC1P02654 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.07■□□□□ 0.64
APOC1P02654 SRD5A1P1-201ENST00000442297 786 ntBASIC19.07■□□□□ 0.64
APOC1P02654 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.07■□□□□ 0.64
APOC1P02654 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APOC1P02654 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APOC1P02654 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
APOC1P02654 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
APOC1P02654 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APOC1P02654 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
APOC1P02654 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
APOC1P02654 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APOC1P02654 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
APOC1P02654 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
APOC1P02654 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
APOC1P02654 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
APOC1P02654 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
APOC1P02654 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APOC1P02654 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
APOC1P02654 AC133637.1-201ENST00000624115 1537 ntBASIC19.05■□□□□ 0.64
APOC1P02654 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.05■□□□□ 0.64
APOC1P02654 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
APOC1P02654 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.05■□□□□ 0.64
APOC1P02654 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APOC1P02654 AC080038.3-201ENST00000623346 1952 ntBASIC19.05■□□□□ 0.64
APOC1P02654 pRNA.6-201ENST00000610482 90 ntBASIC19.05■□□□□ 0.64
APOC1P02654 pRNA.5-201ENST00000612139 90 ntBASIC19.05■□□□□ 0.64
APOC1P02654 pRNA.11-201ENST00000618423 90 ntBASIC19.05■□□□□ 0.64
APOC1P02654 pRNA.13-201ENST00000619112 90 ntBASIC19.05■□□□□ 0.64
APOC1P02654 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APOC1P02654 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APOC1P02654 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
APOC1P02654 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.05■□□□□ 0.64
APOC1P02654 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APOC1P02654 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.05■□□□□ 0.64
APOC1P02654 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
APOC1P02654 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
APOC1P02654 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
APOC1P02654 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
APOC1P02654 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.04■□□□□ 0.64
APOC1P02654 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APOC1P02654 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.04■□□□□ 0.64
APOC1P02654 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
APOC1P02654 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.04■□□□□ 0.64
APOC1P02654 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.04■□□□□ 0.64
APOC1P02654 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.04■□□□□ 0.64
APOC1P02654 AC068587.7-201ENST00000641602 218 ntBASIC19.04■□□□□ 0.64
APOC1P02654 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
APOC1P02654 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APOC1P02654 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.04■□□□□ 0.64
APOC1P02654 C11orf96-202ENST00000528572 1834 ntBASIC19.04■□□□□ 0.64
APOC1P02654 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
APOC1P02654 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.03■□□□□ 0.64
APOC1P02654 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
APOC1P02654 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APOC1P02654 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APOC1P02654 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
APOC1P02654 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.03■□□□□ 0.64
APOC1P02654 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.03■□□□□ 0.64
APOC1P02654 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
APOC1P02654 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
APOC1P02654 AC099791.2-201ENST00000605725 427 ntBASIC19.03■□□□□ 0.64
APOC1P02654 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.03■□□□□ 0.64
APOC1P02654 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
APOC1P02654 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APOC1P02654 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APOC1P02654 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
APOC1P02654 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
APOC1P02654 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
APOC1P02654 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.02■□□□□ 0.64
APOC1P02654 AC137767.1-201ENST00000602918 1920 ntBASIC19.02■□□□□ 0.64
APOC1P02654 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
APOC1P02654 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
APOC1P02654 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
APOC1P02654 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
APOC1P02654 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
APOC1P02654 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
APOC1P02654 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
APOC1P02654 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
APOC1P02654 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
APOC1P02654 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOC1P02654 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOC1P02654 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOC1P02654 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
APOC1P02654 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOC1P02654 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.01■□□□□ 0.63
APOC1P02654 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
APOC1P02654 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOC1P02654 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
APOC1P02654 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
APOC1P02654 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
APOC1P02654 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOC1P02654 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.01■□□□□ 0.63
APOC1P02654 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.01■□□□□ 0.63
APOC1P02654 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
APOC1P02654 DUX4L19-201ENST00000557448 1267 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms