Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT4O95628 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT4O95628 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT4O95628 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CNOT4O95628 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 YBX1P1-201ENST00000445822 960 ntBASIC19.19■□□□□ 0.66
CNOT4O95628 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.19■□□□□ 0.66
CNOT4O95628 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.19■□□□□ 0.66
CNOT4O95628 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CNOT4O95628 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT4O95628 AC068473.5-201ENST00000616428 2072 ntBASIC19.18■□□□□ 0.66
CNOT4O95628 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT4O95628 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.18■□□□□ 0.66
CNOT4O95628 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.18■□□□□ 0.66
CNOT4O95628 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT4O95628 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.18■□□□□ 0.66
CNOT4O95628 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT4O95628 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT4O95628 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT4O95628 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.18■□□□□ 0.66
CNOT4O95628 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT4O95628 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT4O95628 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CNOT4O95628 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT4O95628 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CNOT4O95628 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.17■□□□□ 0.66
CNOT4O95628 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT4O95628 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT4O95628 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT4O95628 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.17■□□□□ 0.66
CNOT4O95628 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT4O95628 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT4O95628 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT4O95628 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT4O95628 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT4O95628 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT4O95628 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT4O95628 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT4O95628 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT4O95628 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT4O95628 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT4O95628 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.17■□□□□ 0.66
CNOT4O95628 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT4O95628 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT4O95628 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT4O95628 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CNOT4O95628 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CNOT4O95628 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CNOT4O95628 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.16■□□□□ 0.66
CNOT4O95628 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT4O95628 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.16■□□□□ 0.66
CNOT4O95628 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT4O95628 AC090192.1-201ENST00000517740 490 ntBASIC19.16■□□□□ 0.66
CNOT4O95628 RARRES2P11-201ENST00000635158 484 ntBASIC19.16■□□□□ 0.66
CNOT4O95628 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT4O95628 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CNOT4O95628 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT4O95628 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT4O95628 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.16■□□□□ 0.66
CNOT4O95628 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT4O95628 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT4O95628 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT4O95628 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT4O95628 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT4O95628 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT4O95628 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.15■□□□□ 0.66
CNOT4O95628 AC034268.1-201ENST00000441047 882 ntBASIC19.15■□□□□ 0.66
CNOT4O95628 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.15■□□□□ 0.66
CNOT4O95628 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT4O95628 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.15■□□□□ 0.66
CNOT4O95628 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CNOT4O95628 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT4O95628 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
CNOT4O95628 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.14■□□□□ 0.66
CNOT4O95628 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT4O95628 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.14■□□□□ 0.65
CNOT4O95628 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT4O95628 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT4O95628 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT4O95628 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT4O95628 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.14■□□□□ 0.65
CNOT4O95628 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT4O95628 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CNOT4O95628 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.14■□□□□ 0.65
CNOT4O95628 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT4O95628 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CNOT4O95628 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT4O95628 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms