Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UPK3AO75631 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK3AO75631 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK3AO75631 SLC47A1P1-202ENST00000449666 945 ntBASIC19.43■□□□□ 0.7
UPK3AO75631 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
UPK3AO75631 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UPK3AO75631 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
UPK3AO75631 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UPK3AO75631 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UPK3AO75631 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK3AO75631 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK3AO75631 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.42■□□□□ 0.7
UPK3AO75631 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.42■□□□□ 0.7
UPK3AO75631 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
UPK3AO75631 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.42■□□□□ 0.7
UPK3AO75631 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.42■□□□□ 0.7
UPK3AO75631 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.42■□□□□ 0.7
UPK3AO75631 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
UPK3AO75631 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK3AO75631 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK3AO75631 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.41■□□□□ 0.7
UPK3AO75631 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPK3AO75631 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPK3AO75631 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK3AO75631 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK3AO75631 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK3AO75631 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UPK3AO75631 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPK3AO75631 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.41■□□□□ 0.7
UPK3AO75631 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
UPK3AO75631 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPK3AO75631 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.41■□□□□ 0.7
UPK3AO75631 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPK3AO75631 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK3AO75631 LINC01960-201ENST00000563759 1884 ntBASIC19.41■□□□□ 0.7
UPK3AO75631 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPK3AO75631 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.41■□□□□ 0.7
UPK3AO75631 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
UPK3AO75631 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK3AO75631 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK3AO75631 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UPK3AO75631 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.4■□□□□ 0.7
UPK3AO75631 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK3AO75631 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
UPK3AO75631 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK3AO75631 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
UPK3AO75631 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.4■□□□□ 0.7
UPK3AO75631 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.4■□□□□ 0.7
UPK3AO75631 AL031432.3-201ENST00000607698 485 ntBASIC19.4■□□□□ 0.7
UPK3AO75631 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK3AO75631 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK3AO75631 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
UPK3AO75631 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPK3AO75631 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPK3AO75631 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPK3AO75631 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UPK3AO75631 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK3AO75631 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK3AO75631 EDA-201ENST00000338901 1233 ntBASIC19.39■□□□□ 0.69
UPK3AO75631 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPK3AO75631 BX842568.3-201ENST00000418104 571 ntBASIC19.39■□□□□ 0.69
UPK3AO75631 AC133561.4-201ENST00000566112 224 ntBASIC19.39■□□□□ 0.69
UPK3AO75631 AL355001.2-201ENST00000620617 1191 ntBASIC19.39■□□□□ 0.69
UPK3AO75631 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.39■□□□□ 0.69
UPK3AO75631 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.39■□□□□ 0.69
UPK3AO75631 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.39■□□□□ 0.69
UPK3AO75631 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
UPK3AO75631 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UPK3AO75631 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UPK3AO75631 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.38■□□□□ 0.69
UPK3AO75631 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK3AO75631 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK3AO75631 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK3AO75631 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UPK3AO75631 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.38■□□□□ 0.69
UPK3AO75631 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.38■□□□□ 0.69
UPK3AO75631 AC008764.7-201ENST00000593779 1081 ntBASIC19.38■□□□□ 0.69
UPK3AO75631 AC233992.3-201ENST00000607491 485 ntBASIC19.38■□□□□ 0.69
UPK3AO75631 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.38■□□□□ 0.69
UPK3AO75631 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPK3AO75631 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.37■□□□□ 0.69
UPK3AO75631 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK3AO75631 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK3AO75631 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
UPK3AO75631 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK3AO75631 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
UPK3AO75631 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK3AO75631 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK3AO75631 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UPK3AO75631 MIR638-201ENST00000385237 100 ntBASIC19.37■□□□□ 0.69
UPK3AO75631 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UPK3AO75631 AP001330.3-201ENST00000520123 633 ntBASIC19.37■□□□□ 0.69
UPK3AO75631 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
UPK3AO75631 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.37■□□□□ 0.69
UPK3AO75631 AL031602.1-201ENST00000633169 911 ntBASIC19.37■□□□□ 0.69
UPK3AO75631 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK3AO75631 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPK3AO75631 FBXW4P1-201ENST00000426721 2239 ntBASIC19.37■□□□□ 0.69
UPK3AO75631 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.37■□□□□ 0.69
UPK3AO75631 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms