Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RRP8O43159 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.47■□□□□ 0.87
RRP8O43159 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RRP8O43159 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.47■□□□□ 0.87
RRP8O43159 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RRP8O43159 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RRP8O43159 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RRP8O43159 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RRP8O43159 AC142381.3-201ENST00000568208 1670 ntBASIC20.46■□□□□ 0.87
RRP8O43159 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RRP8O43159 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RRP8O43159 PRORSD1P-201ENST00000295112 541 ntBASIC20.46■□□□□ 0.87
RRP8O43159 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RRP8O43159 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RRP8O43159 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RRP8O43159 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RRP8O43159 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RRP8O43159 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.46■□□□□ 0.87
RRP8O43159 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.46■□□□□ 0.87
RRP8O43159 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RRP8O43159 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RRP8O43159 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RRP8O43159 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RRP8O43159 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RRP8O43159 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.45■□□□□ 0.86
RRP8O43159 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.45■□□□□ 0.86
RRP8O43159 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.45■□□□□ 0.86
RRP8O43159 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RRP8O43159 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RRP8O43159 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.45■□□□□ 0.86
RRP8O43159 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RRP8O43159 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RRP8O43159 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RRP8O43159 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.45■□□□□ 0.86
RRP8O43159 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RRP8O43159 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RRP8O43159 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.44■□□□□ 0.86
RRP8O43159 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RRP8O43159 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RRP8O43159 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RRP8O43159 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.44■□□□□ 0.86
RRP8O43159 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RRP8O43159 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RRP8O43159 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.44■□□□□ 0.86
RRP8O43159 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RRP8O43159 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.44■□□□□ 0.86
RRP8O43159 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RRP8O43159 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.44■□□□□ 0.86
RRP8O43159 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RRP8O43159 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RRP8O43159 OXCT2P1-201ENST00000447263 1535 ntBASIC20.43■□□□□ 0.86
RRP8O43159 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RRP8O43159 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.43■□□□□ 0.86
RRP8O43159 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RRP8O43159 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.43■□□□□ 0.86
RRP8O43159 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RRP8O43159 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RRP8O43159 AC009237.3-201ENST00000393279 1427 ntBASIC20.43■□□□□ 0.86
RRP8O43159 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.43■□□□□ 0.86
RRP8O43159 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RRP8O43159 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RRP8O43159 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RRP8O43159 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RRP8O43159 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RRP8O43159 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.42■□□□□ 0.86
RRP8O43159 RPS2P52-201ENST00000469610 820 ntBASIC20.42■□□□□ 0.86
RRP8O43159 AC098934.4-201ENST00000564127 592 ntBASIC20.42■□□□□ 0.86
RRP8O43159 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RRP8O43159 AP001160.3-201ENST00000601484 763 ntBASIC20.42■□□□□ 0.86
RRP8O43159 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RRP8O43159 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.42■□□□□ 0.86
RRP8O43159 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RRP8O43159 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RRP8O43159 AC004687.1-201ENST00000579003 1625 ntBASIC20.42■□□□□ 0.86
RRP8O43159 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RRP8O43159 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RRP8O43159 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.41■□□□□ 0.86
RRP8O43159 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.41■□□□□ 0.86
RRP8O43159 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RRP8O43159 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.41■□□□□ 0.86
RRP8O43159 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.41■□□□□ 0.86
RRP8O43159 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RRP8O43159 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RRP8O43159 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RRP8O43159 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RRP8O43159 AC005224.4-201ENST00000583262 1652 ntBASIC20.41■□□□□ 0.86
RRP8O43159 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RRP8O43159 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RRP8O43159 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RRP8O43159 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RRP8O43159 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RRP8O43159 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.4■□□□□ 0.86
RRP8O43159 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.4■□□□□ 0.86
RRP8O43159 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RRP8O43159 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.39■□□□□ 0.85
RRP8O43159 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.39■□□□□ 0.85
RRP8O43159 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RRP8O43159 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RRP8O43159 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RRP8O43159 DUSP5P2-201ENST00000426873 1033 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms