Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.24■□□□□ 0.67
CCL21O00585 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CCL21O00585 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCL21O00585 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL21O00585 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.24■□□□□ 0.67
CCL21O00585 AL138781.1-201ENST00000566567 1274 ntBASIC19.24■□□□□ 0.67
CCL21O00585 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.24■□□□□ 0.67
CCL21O00585 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL21O00585 AP001160.3-201ENST00000601484 763 ntBASIC19.24■□□□□ 0.67
CCL21O00585 MYCNOS-205ENST00000641950 531 ntBASIC19.24■□□□□ 0.67
CCL21O00585 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL21O00585 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL21O00585 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCL21O00585 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.24■□□□□ 0.67
CCL21O00585 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.24■□□□□ 0.67
CCL21O00585 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCL21O00585 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL21O00585 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL21O00585 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL21O00585 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL21O00585 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.23■□□□□ 0.67
CCL21O00585 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL21O00585 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.23■□□□□ 0.67
CCL21O00585 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL21O00585 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.23■□□□□ 0.67
CCL21O00585 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL21O00585 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCL21O00585 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CCL21O00585 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCL21O00585 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.23■□□□□ 0.67
CCL21O00585 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCL21O00585 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL21O00585 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL21O00585 AC004812.2-201ENST00000611079 2094 ntBASIC19.22■□□□□ 0.67
CCL21O00585 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL21O00585 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCL21O00585 GUSBP6-202ENST00000438529 1198 ntBASIC19.22■□□□□ 0.67
CCL21O00585 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCL21O00585 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL21O00585 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CCL21O00585 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCL21O00585 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCL21O00585 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCL21O00585 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.22■□□□□ 0.67
CCL21O00585 DUSP8P3-201ENST00000399571 1760 ntBASIC19.21■□□□□ 0.67
CCL21O00585 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.21■□□□□ 0.67
CCL21O00585 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCL21O00585 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL21O00585 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL21O00585 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.21■□□□□ 0.67
CCL21O00585 FAM201B-201ENST00000458407 597 ntBASIC19.21■□□□□ 0.67
CCL21O00585 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.21■□□□□ 0.67
CCL21O00585 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.21■□□□□ 0.67
CCL21O00585 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL21O00585 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL21O00585 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCL21O00585 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCL21O00585 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL21O00585 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.2■□□□□ 0.66
CCL21O00585 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL21O00585 AF201337.1-201ENST00000520239 748 ntBASIC19.2■□□□□ 0.66
CCL21O00585 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.2■□□□□ 0.66
CCL21O00585 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
CCL21O00585 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL21O00585 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL21O00585 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL21O00585 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL21O00585 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL21O00585 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCL21O00585 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL21O00585 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.19■□□□□ 0.66
CCL21O00585 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.19■□□□□ 0.66
CCL21O00585 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL21O00585 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL21O00585 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.19■□□□□ 0.66
CCL21O00585 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.19■□□□□ 0.66
CCL21O00585 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.19■□□□□ 0.66
CCL21O00585 AC133041.1-202ENST00000642053 222 ntBASIC19.19■□□□□ 0.66
CCL21O00585 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL21O00585 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL21O00585 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCL21O00585 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL21O00585 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL21O00585 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL21O00585 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL21O00585 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.18■□□□□ 0.66
CCL21O00585 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCL21O00585 AL139125.2-201ENST00000623134 1869 ntBASIC19.18■□□□□ 0.66
CCL21O00585 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL21O00585 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCL21O00585 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCL21O00585 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCL21O00585 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CCL21O00585 AC069152.1-201ENST00000438030 544 ntBASIC19.18■□□□□ 0.66
CCL21O00585 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCL21O00585 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.18■□□□□ 0.66
CCL21O00585 AC105036.2-201ENST00000569468 176 ntBASIC19.18■□□□□ 0.66
CCL21O00585 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CCL21O00585 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
CCL21O00585 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms