Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPK3BL1B0FP48 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UPK3BL1B0FP48 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.93■■□□□ 1.1
UPK3BL1B0FP48 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPK3BL1B0FP48 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
UPK3BL1B0FP48 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPK3BL1B0FP48 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPK3BL1B0FP48 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 AC105233.4-201ENST00000642045 216 ntBASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPK3BL1B0FP48 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.91■■□□□ 1.1
UPK3BL1B0FP48 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPK3BL1B0FP48 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPK3BL1B0FP48 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.91■■□□□ 1.1
UPK3BL1B0FP48 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.91■■□□□ 1.1
UPK3BL1B0FP48 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.91■■□□□ 1.1
UPK3BL1B0FP48 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UPK3BL1B0FP48 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.91■■□□□ 1.1
UPK3BL1B0FP48 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.91■■□□□ 1.1
UPK3BL1B0FP48 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.91■■□□□ 1.1
UPK3BL1B0FP48 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.91■■□□□ 1.1
UPK3BL1B0FP48 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.91■■□□□ 1.1
UPK3BL1B0FP48 OXCT2P1-201ENST00000447263 1535 ntBASIC21.9■■□□□ 1.1
UPK3BL1B0FP48 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UPK3BL1B0FP48 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPK3BL1B0FP48 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPK3BL1B0FP48 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPK3BL1B0FP48 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
UPK3BL1B0FP48 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.9■■□□□ 1.1
UPK3BL1B0FP48 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPK3BL1B0FP48 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
UPK3BL1B0FP48 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
UPK3BL1B0FP48 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
UPK3BL1B0FP48 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
UPK3BL1B0FP48 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UPK3BL1B0FP48 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPK3BL1B0FP48 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.89■■□□□ 1.09
UPK3BL1B0FP48 C9orf163-202ENST00000624034 2573 ntBASIC21.89■■□□□ 1.09
UPK3BL1B0FP48 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 AC133561.1-201ENST00000568600 2415 ntBASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPK3BL1B0FP48 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 CDCA4P2-201ENST00000441182 718 ntBASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.87■■□□□ 1.09
UPK3BL1B0FP48 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPK3BL1B0FP48 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms