Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 AC007375.3-201ENST00000600936 2314 ntBASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBAL3A6NHL2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TUBAL3A6NHL2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TUBAL3A6NHL2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TUBAL3A6NHL2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TUBAL3A6NHL2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.39■□□□□ 0.69
TUBAL3A6NHL2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TUBAL3A6NHL2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TUBAL3A6NHL2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.39■□□□□ 0.69
TUBAL3A6NHL2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TUBAL3A6NHL2 LINC02228-203ENST00000641970 1355 ntBASIC19.39■□□□□ 0.69
TUBAL3A6NHL2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TUBAL3A6NHL2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TUBAL3A6NHL2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 AP005435.1-201ENST00000529293 1178 ntBASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 CCDC92B-201ENST00000575506 885 ntBASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 AC144652.1-201ENST00000609974 1624 ntBASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBAL3A6NHL2 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBAL3A6NHL2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 KRT18P14-201ENST00000534205 1250 ntBASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 NTF6G-201ENST00000591094 616 ntBASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBAL3A6NHL2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
TUBAL3A6NHL2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms