Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV6-7A0A0A0MS04 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRBV6-7A0A0A0MS04 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV6-7A0A0A0MS04 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 C17orf82-201ENST00000623772 1530 ntBASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-7A0A0A0MS04 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 MIR4787-201ENST00000607364 84 ntBASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV6-7A0A0A0MS04 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 LINC01521-201ENST00000504184 1943 ntBASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV6-7A0A0A0MS04 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-7A0A0A0MS04 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV6-7A0A0A0MS04 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV6-7A0A0A0MS04 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.09■□□□□ 0.49
TRBV6-7A0A0A0MS04 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
TRBV6-7A0A0A0MS04 AC010997.5-201ENST00000609182 354 ntBASIC18.09■□□□□ 0.49
TRBV6-7A0A0A0MS04 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV6-7A0A0A0MS04 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV6-7A0A0A0MS04 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.09■□□□□ 0.49
TRBV6-7A0A0A0MS04 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV6-7A0A0A0MS04 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TRBV6-7A0A0A0MS04 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.08■□□□□ 0.49
TRBV6-7A0A0A0MS04 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
TRBV6-7A0A0A0MS04 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV6-7A0A0A0MS04 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
TRBV6-7A0A0A0MS04 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV6-7A0A0A0MS04 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV6-7A0A0A0MS04 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV6-7A0A0A0MS04 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV6-7A0A0A0MS04 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.08■□□□□ 0.48
TRBV6-7A0A0A0MS04 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-7A0A0A0MS04 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms