Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV30A0A087WSZ9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 AC092171.4-201ENST00000609130 632 ntBASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV30A0A087WSZ9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV30A0A087WSZ9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV30A0A087WSZ9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV30A0A087WSZ9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 AC068587.7-201ENST00000641602 218 ntBASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV30A0A087WSZ9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV30A0A087WSZ9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 AC133637.1-201ENST00000624115 1537 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms