Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 NPSR1-209ENST00000531252 1377 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC11.32□□□□□ -0.6
P04436 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC11.32□□□□□ -0.6
P04436 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
P04436 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.32□□□□□ -0.6
P04436 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
P04436 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
P04436 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
P04436 OR4X1-201ENST00000320048 918 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P04436 SUPT3H-201ENST00000371458 728 ntTSL 5 BASIC11.32□□□□□ -0.6
P04436 RN7SKP218-201ENST00000410222 292 ntBASIC11.32□□□□□ -0.6
P04436 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P04436 AC074085.2-201ENST00000416734 428 ntBASIC11.32□□□□□ -0.6
P04436 AC211485.1-201ENST00000417100 1107 ntBASIC11.32□□□□□ -0.6
P04436 AC009237.11-201ENST00000425635 265 ntBASIC11.32□□□□□ -0.6
P04436 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 LINC00106-201ENST00000430235 370 ntTSL 2 BASIC11.32□□□□□ -0.6
P04436 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 AC018892.1-201ENST00000451098 265 ntBASIC11.32□□□□□ -0.6
P04436 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 LINC02105-201ENST00000504552 1003 ntTSL 3 BASIC11.32□□□□□ -0.6
P04436 AC142391.1-201ENST00000515823 1002 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
P04436 MRPS27-212ENST00000522095 504 ntTSL 2 BASIC11.32□□□□□ -0.6
P04436 AL136298.3-201ENST00000556746 445 ntBASIC11.32□□□□□ -0.6
P04436 MYL4-208ENST00000572316 850 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P04436 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC11.32□□□□□ -0.6
P04436 AC015818.3-201ENST00000583797 589 ntBASIC11.32□□□□□ -0.6
P04436 BOLA3P2-201ENST00000586496 323 ntBASIC11.32□□□□□ -0.6
P04436 AP002414.5-201ENST00000591853 258 ntTSL 4 BASIC11.32□□□□□ -0.6
P04436 AC020663.2-201ENST00000592465 720 ntTSL 3 BASIC11.32□□□□□ -0.6
P04436 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC11.32□□□□□ -0.6
P04436 ZEB1-AS1-207ENST00000606286 476 ntTSL 4 BASIC11.32□□□□□ -0.6
P04436 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P04436 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
P04436 AL137028.1-201ENST00000620521 555 ntBASIC11.32□□□□□ -0.6
P04436 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
P04436 ZNF274-201ENST00000326804 2447 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
P04436 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 STYX-201ENST00000354586 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 C2-211ENST00000469372 1906 ntTSL 2 BASIC11.32□□□□□ -0.6
P04436 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
P04436 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P04436 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.32□□□□□ -0.6
P04436 AC019294.1-202ENST00000566174 2071 ntBASIC11.32□□□□□ -0.6
P04436 MAGEA9B-203ENST00000595065 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 EXOC7-205ENST00000405575 2208 ntTSL 5 BASIC11.32□□□□□ -0.6
P04436 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.32□□□□□ -0.6
P04436 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04436 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 ANKRD20A8P-201ENST00000432432 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 EPB41L2-203ENST00000368128 4456 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
P04436 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
P04436 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC11.31□□□□□ -0.6
P04436 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC11.31□□□□□ -0.6
P04436 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 CEP41-201ENST00000223208 6513 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 ARSF-201ENST00000359361 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 MRPL24-201ENST00000361531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
P04436 KRT8P6-201ENST00000399259 1207 ntBASIC11.31□□□□□ -0.6
P04436 KANK1P1-201ENST00000400619 1234 ntBASIC11.31□□□□□ -0.6
P04436 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC11.31□□□□□ -0.6
P04436 MBL3P-201ENST00000402234 644 ntBASIC11.31□□□□□ -0.6
P04436 SGCZ-202ENST00000421524 867 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 AC007881.1-201ENST00000437460 187 ntBASIC11.31□□□□□ -0.6
P04436 AC023115.1-201ENST00000450944 574 ntTSL 4 BASIC11.31□□□□□ -0.6
P04436 LINC00879-202ENST00000463200 1041 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 AC104819.2-201ENST00000507181 163 ntBASIC11.31□□□□□ -0.6
P04436 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC11.31□□□□□ -0.6
P04436 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04436 AC023078.7-201ENST00000532712 961 ntBASIC11.31□□□□□ -0.6
P04436 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC11.31□□□□□ -0.6
P04436 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC11.31□□□□□ -0.6
P04436 AC127537.3-201ENST00000566532 749 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms