Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL035448.1-201ENST00000439529 1831 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 CRX-202ENST00000539067 2275 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 IFT81-209ENST00000552912 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 DNAI2-206ENST00000582036 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 MARCH7-209ENST00000539065 3303 ntTSL 2 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 DDX3P1-201ENST00000418231 1950 ntBASIC13.2□□□□□ -0.3
LMO3Q8TAP4 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 PIGB-201ENST00000164305 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 OR7E12P-201ENST00000344740 973 ntBASIC13.2□□□□□ -0.3
LMO3Q8TAP4 SUPT3H-201ENST00000371458 728 ntTSL 5 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 TPT1P9-201ENST00000413759 514 ntBASIC13.2□□□□□ -0.3
LMO3Q8TAP4 CRIP1P2-201ENST00000425396 228 ntBASIC13.2□□□□□ -0.3
LMO3Q8TAP4 OR4C14P-201ENST00000440929 923 ntBASIC13.2□□□□□ -0.3
LMO3Q8TAP4 SRP9P1-201ENST00000445874 261 ntBASIC13.2□□□□□ -0.3
LMO3Q8TAP4 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 GUSBP3-202ENST00000513408 1296 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 AP000911.1-204ENST00000533091 571 ntTSL 4 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 LINC02450-201ENST00000550177 1003 ntTSL 2 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 AC090825.2-201ENST00000557959 739 ntBASIC13.2□□□□□ -0.3
LMO3Q8TAP4 AC087699.1-201ENST00000558111 393 ntBASIC13.2□□□□□ -0.3
LMO3Q8TAP4 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 AC022167.1-201ENST00000564919 409 ntTSL 3 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 CASP16P-204ENST00000635032 809 ntBASIC13.2□□□□□ -0.3
LMO3Q8TAP4 AC137936.2-201ENST00000636329 620 ntBASIC13.2□□□□□ -0.3
LMO3Q8TAP4 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 LINC02372-201ENST00000507482 1486 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 BTD-201ENST00000303498 2075 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 TRAF3IP2-202ENST00000359831 2264 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 AL445989.1-201ENST00000611641 1436 ntBASIC13.2□□□□□ -0.3
LMO3Q8TAP4 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 PPP1R26P1-201ENST00000474415 3613 ntBASIC13.2□□□□□ -0.3
LMO3Q8TAP4 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 MCMDC2-202ENST00000396592 2373 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 TBATA-201ENST00000299290 1583 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 TBATA-203ENST00000456372 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LMO3Q8TAP4 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 LILRA1-202ENST00000453777 2313 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 OR2H2-201ENST00000383640 1514 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 GHRL-201ENST00000287656 1313 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 RFC3-201ENST00000380071 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 CCDC144NL-AS1-216ENST00000582583 1670 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 RAB37-212ENST00000528438 1494 ntTSL 2 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 CEP63-204ENST00000383229 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 MARK3-201ENST00000216288 2911 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 CXorf56-201ENST00000320339 2372 ntTSL 2 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 POP5-201ENST00000341039 913 ntTSL 2 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 SGCZ-202ENST00000421524 867 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 AC023115.1-201ENST00000450944 574 ntTSL 4 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 AC007679.1-201ENST00000458609 502 ntBASIC13.19□□□□□ -0.3
LMO3Q8TAP4 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 RN7SL105P-201ENST00000475661 299 ntBASIC13.19□□□□□ -0.3
LMO3Q8TAP4 AC020917.1-201ENST00000494084 893 ntBASIC13.19□□□□□ -0.3
LMO3Q8TAP4 AC016924.1-201ENST00000511512 501 ntTSL 3 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 PHLDB1-217ENST00000530708 874 ntTSL 5 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 BORCS5-203ENST00000542728 580 ntTSL 3 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 AC006273.1-201ENST00000606966 861 ntBASIC13.19□□□□□ -0.3
LMO3Q8TAP4 EPM2A-213ENST00000638778 813 ntTSL 4 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 NDUFAF6-202ENST00000396113 2549 ntTSL 5 BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LMO3Q8TAP4 AC079594.2-201ENST00000483754 3360 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms