Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 BCO2-202ENST00000361053 1868 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 ITPKB-IT1-201ENST00000412918 746 ntTSL 2 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 LINC01044-201ENST00000413637 657 ntTSL 3 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 THEMIS3P-201ENST00000416112 1586 ntBASIC12.41□□□□□ -0.42
NCDNQ9UBB6 AL031663.2-201ENST00000417630 355 ntTSL 2 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 FAM230B-205ENST00000424410 1856 ntTSL 5 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 AC099796.2-201ENST00000444140 108 ntBASIC12.41□□□□□ -0.42
NCDNQ9UBB6 PQLC2L-204ENST00000459838 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 PQLC2L-206ENST00000468043 883 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 AC015909.2-201ENST00000523083 547 ntTSL 3 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 HCK-208ENST00000534862 1581 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 AC013489.2-201ENST00000558732 276 ntBASIC12.41□□□□□ -0.42
NCDNQ9UBB6 AC009654.1-201ENST00000560503 757 ntTSL 3 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 AC126773.3-201ENST00000562089 893 ntBASIC12.41□□□□□ -0.42
NCDNQ9UBB6 GOLGA8Q-201ENST00000562783 1899 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 IGHV2OR16-5-201ENST00000567458 358 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 MT3-206ENST00000570176 579 ntTSL 2 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 FGF11-205ENST00000575398 990 ntTSL 2 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 RN7SL217P-201ENST00000584520 286 ntBASIC12.41□□□□□ -0.42
NCDNQ9UBB6 TSPAN16-204ENST00000590327 997 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.41□□□□□ -0.42
NCDNQ9UBB6 BPIFA1-204ENST00000618484 907 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 HVCN1-209ENST00000620084 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 AC092723.2-201ENST00000624955 793 ntBASIC12.41□□□□□ -0.42
NCDNQ9UBB6 ETV7-208ENST00000627426 1285 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 LINC01702-203ENST00000635350 745 ntTSL 5 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 AC009542.2-204ENST00000636543 433 ntTSL 3 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 HCK-211ENST00000639405 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.41□□□□□ -0.42
NCDNQ9UBB6 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 CDK5-201ENST00000297518 783 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 SPANXD-201ENST00000370515 682 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 LINC01128-201ENST00000415295 894 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 AC004231.1-201ENST00000418393 815 ntTSL 5 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 AL356488.1-201ENST00000429752 609 ntBASIC12.4□□□□□ -0.42
NCDNQ9UBB6 CYP2F2P-201ENST00000437853 1056 ntBASIC12.4□□□□□ -0.42
NCDNQ9UBB6 ANKRD20A11P-205ENST00000442192 920 ntTSL 3 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 CHCHD3P3-201ENST00000446783 640 ntBASIC12.4□□□□□ -0.42
NCDNQ9UBB6 SELENOS-207ENST00000531964 764 ntTSL 3 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 RPL12-205ENST00000536368 499 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 DYNLL1P2-201ENST00000554807 270 ntBASIC12.4□□□□□ -0.42
NCDNQ9UBB6 AC121320.1-201ENST00000580975 839 ntTSL 3 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 NARF-IT1-201ENST00000584012 769 ntTSL 5 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 Metazoa_SRP.198-201ENST00000610617 323 ntBASIC12.4□□□□□ -0.42
NCDNQ9UBB6 LDAH-213ENST00000626491 1179 ntTSL 2 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 TNNT3-217ENST00000641225 877 ntBASIC12.4□□□□□ -0.42
NCDNQ9UBB6 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 CCDC144NL-AS1-216ENST00000582583 1670 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 PRAMEF20-202ENST00000602960 1502 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 TMLHE-201ENST00000334398 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NCDNQ9UBB6 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
NCDNQ9UBB6 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
NCDNQ9UBB6 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
NCDNQ9UBB6 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
NCDNQ9UBB6 ARSG-202ENST00000452479 1733 ntTSL 5 BASIC12.4□□□□□ -0.43
NCDNQ9UBB6 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.4□□□□□ -0.43
NCDNQ9UBB6 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NCDNQ9UBB6 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NCDNQ9UBB6 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NCDNQ9UBB6 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NCDNQ9UBB6 PSMC1P1-201ENST00000478110 1320 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms