Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.49■□□□□ 0.87
CLCA3PQ9Y6N3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 AC105265.2-201ENST00000467189 838 ntBASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 AC087239.1-201ENST00000622671 572 ntBASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.48■□□□□ 0.87
CLCA3PQ9Y6N3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CLCA3PQ9Y6N3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.46■□□□□ 0.87
CLCA3PQ9Y6N3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLCA3PQ9Y6N3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCA3PQ9Y6N3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.46■□□□□ 0.87
CLCA3PQ9Y6N3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.46■□□□□ 0.87
CLCA3PQ9Y6N3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCA3PQ9Y6N3 LINC01960-201ENST00000563759 1884 ntBASIC20.46■□□□□ 0.87
CLCA3PQ9Y6N3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CLCA3PQ9Y6N3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCA3PQ9Y6N3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCA3PQ9Y6N3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCA3PQ9Y6N3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLCA3PQ9Y6N3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.46■□□□□ 0.87
CLCA3PQ9Y6N3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.87
CLCA3PQ9Y6N3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 IGHV3-19-201ENST00000521488 291 ntBASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 AL031602.1-201ENST00000633169 911 ntBASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 TSPY26P-201ENST00000476365 1326 ntBASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLCA3PQ9Y6N3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA3PQ9Y6N3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA3PQ9Y6N3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA3PQ9Y6N3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA3PQ9Y6N3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA3PQ9Y6N3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA3PQ9Y6N3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA3PQ9Y6N3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CLCA3PQ9Y6N3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CLCA3PQ9Y6N3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA3PQ9Y6N3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA3PQ9Y6N3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLCA3PQ9Y6N3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCA3PQ9Y6N3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCA3PQ9Y6N3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCA3PQ9Y6N3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.43■□□□□ 0.86
CLCA3PQ9Y6N3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.43■□□□□ 0.86
CLCA3PQ9Y6N3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.43■□□□□ 0.86
CLCA3PQ9Y6N3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.43■□□□□ 0.86
CLCA3PQ9Y6N3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.43■□□□□ 0.86
CLCA3PQ9Y6N3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.43■□□□□ 0.86
CLCA3PQ9Y6N3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCA3PQ9Y6N3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCA3PQ9Y6N3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CLCA3PQ9Y6N3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCA3PQ9Y6N3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.42■□□□□ 0.86
CLCA3PQ9Y6N3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CLCA3PQ9Y6N3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCA3PQ9Y6N3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCA3PQ9Y6N3 AL117328.2-201ENST00000624617 1940 ntBASIC20.42■□□□□ 0.86
CLCA3PQ9Y6N3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.42■□□□□ 0.86
CLCA3PQ9Y6N3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCA3PQ9Y6N3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms