Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.55■■□□□ 1.68
SNCAIPQ9Y6H5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SNCAIPQ9Y6H5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.54■■□□□ 1.68
SNCAIPQ9Y6H5 AC231657.2-201ENST00000624556 255 ntBASIC25.54■■□□□ 1.68
SNCAIPQ9Y6H5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SNCAIPQ9Y6H5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.54■■□□□ 1.68
SNCAIPQ9Y6H5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.53■■□□□ 1.68
SNCAIPQ9Y6H5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.53■■□□□ 1.68
SNCAIPQ9Y6H5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SNCAIPQ9Y6H5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SNCAIPQ9Y6H5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.53■■□□□ 1.68
SNCAIPQ9Y6H5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.53■■□□□ 1.68
SNCAIPQ9Y6H5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.53■■□□□ 1.68
SNCAIPQ9Y6H5 DUSP8P3-201ENST00000399571 1760 ntBASIC25.53■■□□□ 1.68
SNCAIPQ9Y6H5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SNCAIPQ9Y6H5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SNCAIPQ9Y6H5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.53■■□□□ 1.68
SNCAIPQ9Y6H5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
SNCAIPQ9Y6H5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SNCAIPQ9Y6H5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.52■■□□□ 1.68
SNCAIPQ9Y6H5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
SNCAIPQ9Y6H5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.52■■□□□ 1.68
SNCAIPQ9Y6H5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.52■■□□□ 1.68
SNCAIPQ9Y6H5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.52■■□□□ 1.68
SNCAIPQ9Y6H5 AL138781.1-201ENST00000566567 1274 ntBASIC25.52■■□□□ 1.68
SNCAIPQ9Y6H5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SNCAIPQ9Y6H5 AC005181.1-201ENST00000604782 1256 ntBASIC25.52■■□□□ 1.68
SNCAIPQ9Y6H5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.52■■□□□ 1.68
SNCAIPQ9Y6H5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 LINC01124-201ENST00000409786 2117 ntBASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 AC007322.1-201ENST00000426983 750 ntBASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 AC009237.3-201ENST00000393279 1427 ntBASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.51■■□□□ 1.67
SNCAIPQ9Y6H5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.5■■□□□ 1.67
SNCAIPQ9Y6H5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SNCAIPQ9Y6H5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.5■■□□□ 1.67
SNCAIPQ9Y6H5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC25.5■■□□□ 1.67
SNCAIPQ9Y6H5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.5■■□□□ 1.67
SNCAIPQ9Y6H5 KRT18P6-201ENST00000555540 1265 ntBASIC25.5■■□□□ 1.67
SNCAIPQ9Y6H5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SNCAIPQ9Y6H5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.5■■□□□ 1.67
SNCAIPQ9Y6H5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
SNCAIPQ9Y6H5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNCAIPQ9Y6H5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNCAIPQ9Y6H5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SNCAIPQ9Y6H5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNCAIPQ9Y6H5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNCAIPQ9Y6H5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SNCAIPQ9Y6H5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SNCAIPQ9Y6H5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.49■■□□□ 1.67
SNCAIPQ9Y6H5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.49■■□□□ 1.67
SNCAIPQ9Y6H5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.49■■□□□ 1.67
SNCAIPQ9Y6H5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SNCAIPQ9Y6H5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SNCAIPQ9Y6H5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
SNCAIPQ9Y6H5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 AC020928.2-201ENST00000588717 2197 ntBASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 AC066615.1-201ENST00000640911 628 ntBASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SNCAIPQ9Y6H5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 AL139125.2-201ENST00000623134 1869 ntBASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 MYCNOS-205ENST00000641950 531 ntBASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SNCAIPQ9Y6H5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SNCAIPQ9Y6H5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms