Protein–RNA interactions for Protein: Q9NXP7

GIN1, Gypsy retrotransposon integrase-like protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1Q9NXP7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GIN1Q9NXP7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
GIN1Q9NXP7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
GIN1Q9NXP7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
GIN1Q9NXP7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.52■□□□□ 0.87
GIN1Q9NXP7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 AL512631.2-201ENST00000604634 923 ntBASIC20.51■□□□□ 0.87
GIN1Q9NXP7 AC092171.4-201ENST00000609130 632 ntBASIC20.51■□□□□ 0.87
GIN1Q9NXP7 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.51■□□□□ 0.87
GIN1Q9NXP7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.51■□□□□ 0.87
GIN1Q9NXP7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.5■□□□□ 0.87
GIN1Q9NXP7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
GIN1Q9NXP7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 SRD5A1P1-201ENST00000442297 786 ntBASIC20.49■□□□□ 0.87
GIN1Q9NXP7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GIN1Q9NXP7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.48■□□□□ 0.87
GIN1Q9NXP7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
GIN1Q9NXP7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GIN1Q9NXP7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GIN1Q9NXP7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GIN1Q9NXP7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.48■□□□□ 0.87
GIN1Q9NXP7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.48■□□□□ 0.87
GIN1Q9NXP7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GIN1Q9NXP7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GIN1Q9NXP7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GIN1Q9NXP7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.48■□□□□ 0.87
GIN1Q9NXP7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GIN1Q9NXP7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.48■□□□□ 0.87
GIN1Q9NXP7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.47■□□□□ 0.87
GIN1Q9NXP7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
GIN1Q9NXP7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GIN1Q9NXP7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
GIN1Q9NXP7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GIN1Q9NXP7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GIN1Q9NXP7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GIN1Q9NXP7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.47■□□□□ 0.87
GIN1Q9NXP7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GIN1Q9NXP7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.47■□□□□ 0.87
GIN1Q9NXP7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GIN1Q9NXP7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GIN1Q9NXP7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 AC004687.1-201ENST00000579003 1625 ntBASIC20.46■□□□□ 0.87
GIN1Q9NXP7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 AC099791.2-201ENST00000605725 427 ntBASIC20.46■□□□□ 0.87
GIN1Q9NXP7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
GIN1Q9NXP7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
GIN1Q9NXP7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GIN1Q9NXP7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms