Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NEUROD4Q9HD90 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
NEUROD4Q9HD90 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.51■□□□□ 0.87
NEUROD4Q9HD90 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEUROD4Q9HD90 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEUROD4Q9HD90 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEUROD4Q9HD90 AL139246.5-201ENST00000606645 996 ntBASIC20.51■□□□□ 0.87
NEUROD4Q9HD90 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEUROD4Q9HD90 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NEUROD4Q9HD90 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEUROD4Q9HD90 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NEUROD4Q9HD90 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 AL512631.2-201ENST00000604634 923 ntBASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 AL031602.1-201ENST00000633169 911 ntBASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
NEUROD4Q9HD90 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEUROD4Q9HD90 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
NEUROD4Q9HD90 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEUROD4Q9HD90 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEUROD4Q9HD90 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEUROD4Q9HD90 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NEUROD4Q9HD90 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEUROD4Q9HD90 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.49■□□□□ 0.87
NEUROD4Q9HD90 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.49■□□□□ 0.87
NEUROD4Q9HD90 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.49■□□□□ 0.87
NEUROD4Q9HD90 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEUROD4Q9HD90 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEUROD4Q9HD90 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NEUROD4Q9HD90 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
NEUROD4Q9HD90 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 OR2I1P-207ENST00000453522 948 ntBASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 MIR3181-201ENST00000578512 73 ntBASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 AC068587.7-201ENST00000641602 218 ntBASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NEUROD4Q9HD90 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NEUROD4Q9HD90 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 CLDN5-201ENST00000403084 2357 ntBASIC20.45■□□□□ 0.86
NEUROD4Q9HD90 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms