Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RC3H2Q9HBD1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H2Q9HBD1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RC3H2Q9HBD1 AC009237.3-201ENST00000393279 1427 ntBASIC23.44■■□□□ 1.34
RC3H2Q9HBD1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H2Q9HBD1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
RC3H2Q9HBD1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.44■■□□□ 1.34
RC3H2Q9HBD1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.44■■□□□ 1.34
RC3H2Q9HBD1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.44■■□□□ 1.34
RC3H2Q9HBD1 AC231657.2-201ENST00000624556 255 ntBASIC23.44■■□□□ 1.34
RC3H2Q9HBD1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H2Q9HBD1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.44■■□□□ 1.34
RC3H2Q9HBD1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H2Q9HBD1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
RC3H2Q9HBD1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
RC3H2Q9HBD1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.43■■□□□ 1.34
RC3H2Q9HBD1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H2Q9HBD1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H2Q9HBD1 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.43■■□□□ 1.34
RC3H2Q9HBD1 CD99P1-205ENST00000527459 561 ntBASIC23.43■■□□□ 1.34
RC3H2Q9HBD1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.43■■□□□ 1.34
RC3H2Q9HBD1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.43■■□□□ 1.34
RC3H2Q9HBD1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.43■■□□□ 1.34
RC3H2Q9HBD1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H2Q9HBD1 UBE2DNL-204ENST00000602536 740 ntBASIC23.43■■□□□ 1.34
RC3H2Q9HBD1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H2Q9HBD1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RC3H2Q9HBD1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H2Q9HBD1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H2Q9HBD1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H2Q9HBD1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H2Q9HBD1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H2Q9HBD1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H2Q9HBD1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.42■■□□□ 1.34
RC3H2Q9HBD1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.42■■□□□ 1.34
RC3H2Q9HBD1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.42■■□□□ 1.34
RC3H2Q9HBD1 TMEM191A-211ENST00000637163 1067 ntBASIC23.42■■□□□ 1.34
RC3H2Q9HBD1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.42■■□□□ 1.34
RC3H2Q9HBD1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RC3H2Q9HBD1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.42■■□□□ 1.34
RC3H2Q9HBD1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H2Q9HBD1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H2Q9HBD1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H2Q9HBD1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
RC3H2Q9HBD1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H2Q9HBD1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H2Q9HBD1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H2Q9HBD1 AC083906.2-201ENST00000511578 360 ntBASIC23.41■■□□□ 1.34
RC3H2Q9HBD1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H2Q9HBD1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.41■■□□□ 1.34
RC3H2Q9HBD1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RC3H2Q9HBD1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.4■■□□□ 1.34
RC3H2Q9HBD1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RC3H2Q9HBD1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.39■■□□□ 1.34
RC3H2Q9HBD1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
RC3H2Q9HBD1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RC3H2Q9HBD1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
RC3H2Q9HBD1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RC3H2Q9HBD1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.39■■□□□ 1.33
RC3H2Q9HBD1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.39■■□□□ 1.33
RC3H2Q9HBD1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.39■■□□□ 1.33
RC3H2Q9HBD1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.39■■□□□ 1.33
RC3H2Q9HBD1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
RC3H2Q9HBD1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
RC3H2Q9HBD1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RC3H2Q9HBD1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
RC3H2Q9HBD1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.38■■□□□ 1.33
RC3H2Q9HBD1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RC3H2Q9HBD1 AC005181.1-201ENST00000604782 1256 ntBASIC23.38■■□□□ 1.33
RC3H2Q9HBD1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.38■■□□□ 1.33
RC3H2Q9HBD1 MYCNOS-205ENST00000641950 531 ntBASIC23.38■■□□□ 1.33
RC3H2Q9HBD1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RC3H2Q9HBD1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RC3H2Q9HBD1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.38■■□□□ 1.33
RC3H2Q9HBD1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RC3H2Q9HBD1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RC3H2Q9HBD1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
RC3H2Q9HBD1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
RC3H2Q9HBD1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
RC3H2Q9HBD1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.37■■□□□ 1.33
RC3H2Q9HBD1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RC3H2Q9HBD1 AC007322.1-201ENST00000426983 750 ntBASIC23.37■■□□□ 1.33
RC3H2Q9HBD1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.37■■□□□ 1.33
RC3H2Q9HBD1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.37■■□□□ 1.33
RC3H2Q9HBD1 AL138781.1-201ENST00000566567 1274 ntBASIC23.37■■□□□ 1.33
RC3H2Q9HBD1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms