Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.87■■□□□ 1.41
RPGRIP1Q96KN7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RPGRIP1Q96KN7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RPGRIP1Q96KN7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RPGRIP1Q96KN7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RPGRIP1Q96KN7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRIP1Q96KN7 AC007375.3-201ENST00000600936 2314 ntBASIC23.85■■□□□ 1.41
RPGRIP1Q96KN7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.85■■□□□ 1.41
RPGRIP1Q96KN7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.85■■□□□ 1.41
RPGRIP1Q96KN7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPGRIP1Q96KN7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RPGRIP1Q96KN7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPGRIP1Q96KN7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.85■■□□□ 1.41
RPGRIP1Q96KN7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.85■■□□□ 1.41
RPGRIP1Q96KN7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.85■■□□□ 1.41
RPGRIP1Q96KN7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPGRIP1Q96KN7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPGRIP1Q96KN7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPGRIP1Q96KN7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 C17orf82-201ENST00000623772 1530 ntBASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 MIR3181-201ENST00000578512 73 ntBASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 AC131274.2-201ENST00000580697 1507 ntBASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.84■■□□□ 1.41
RPGRIP1Q96KN7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
RPGRIP1Q96KN7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.4
RPGRIP1Q96KN7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 AC009086.3-201ENST00000623486 1008 ntBASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 AL024507.2-201ENST00000606070 2574 ntBASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RPGRIP1Q96KN7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPGRIP1Q96KN7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPGRIP1Q96KN7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.81■■□□□ 1.4
RPGRIP1Q96KN7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.81■■□□□ 1.4
RPGRIP1Q96KN7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPGRIP1Q96KN7 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.81■■□□□ 1.4
RPGRIP1Q96KN7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.81■■□□□ 1.4
RPGRIP1Q96KN7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.81■■□□□ 1.4
RPGRIP1Q96KN7 TSPY26P-201ENST00000476365 1326 ntBASIC23.81■■□□□ 1.4
RPGRIP1Q96KN7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RPGRIP1Q96KN7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPGRIP1Q96KN7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.8■■□□□ 1.4
RPGRIP1Q96KN7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPGRIP1Q96KN7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.8■■□□□ 1.4
RPGRIP1Q96KN7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.8■■□□□ 1.4
RPGRIP1Q96KN7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms