Protein–RNA interactions for Protein: Q96E29

MTERF3, Transcription termination factor 3, mitochondrial, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTERF3Q96E29 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MTERF3Q96E29 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.69■□□□□ 0.9
MTERF3Q96E29 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.69■□□□□ 0.9
MTERF3Q96E29 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
MTERF3Q96E29 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.69■□□□□ 0.9
MTERF3Q96E29 AC092171.4-201ENST00000609130 632 ntBASIC20.69■□□□□ 0.9
MTERF3Q96E29 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
MTERF3Q96E29 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MTERF3Q96E29 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.69■□□□□ 0.9
MTERF3Q96E29 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MTERF3Q96E29 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTERF3Q96E29 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MTERF3Q96E29 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
MTERF3Q96E29 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTERF3Q96E29 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.68■□□□□ 0.9
MTERF3Q96E29 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.68■□□□□ 0.9
MTERF3Q96E29 AC099791.2-201ENST00000605725 427 ntBASIC20.68■□□□□ 0.9
MTERF3Q96E29 pRNA.6-201ENST00000610482 90 ntBASIC20.68■□□□□ 0.9
MTERF3Q96E29 pRNA.5-201ENST00000612139 90 ntBASIC20.68■□□□□ 0.9
MTERF3Q96E29 pRNA.11-201ENST00000618423 90 ntBASIC20.68■□□□□ 0.9
MTERF3Q96E29 pRNA.13-201ENST00000619112 90 ntBASIC20.68■□□□□ 0.9
MTERF3Q96E29 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTERF3Q96E29 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MTERF3Q96E29 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MTERF3Q96E29 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTERF3Q96E29 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
MTERF3Q96E29 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
MTERF3Q96E29 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MTERF3Q96E29 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
MTERF3Q96E29 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MTERF3Q96E29 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.67■□□□□ 0.9
MTERF3Q96E29 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MTERF3Q96E29 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MTERF3Q96E29 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
MTERF3Q96E29 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.67■□□□□ 0.9
MTERF3Q96E29 AC006455.2-201ENST00000429931 906 ntBASIC20.67■□□□□ 0.9
MTERF3Q96E29 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MTERF3Q96E29 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.67■□□□□ 0.9
MTERF3Q96E29 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MTERF3Q96E29 AL031602.1-201ENST00000633169 911 ntBASIC20.67■□□□□ 0.9
MTERF3Q96E29 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MTERF3Q96E29 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MTERF3Q96E29 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MTERF3Q96E29 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.67■□□□□ 0.9
MTERF3Q96E29 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.67■□□□□ 0.9
MTERF3Q96E29 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MTERF3Q96E29 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
MTERF3Q96E29 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MTERF3Q96E29 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MTERF3Q96E29 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
MTERF3Q96E29 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MTERF3Q96E29 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MTERF3Q96E29 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
MTERF3Q96E29 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MTERF3Q96E29 SRD5A1P1-201ENST00000442297 786 ntBASIC20.66■□□□□ 0.9
MTERF3Q96E29 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MTERF3Q96E29 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MTERF3Q96E29 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MTERF3Q96E29 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.66■□□□□ 0.9
MTERF3Q96E29 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MTERF3Q96E29 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.66■□□□□ 0.9
MTERF3Q96E29 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MTERF3Q96E29 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTERF3Q96E29 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTERF3Q96E29 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
MTERF3Q96E29 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTERF3Q96E29 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTERF3Q96E29 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTERF3Q96E29 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MTERF3Q96E29 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MTERF3Q96E29 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.65■□□□□ 0.9
MTERF3Q96E29 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
MTERF3Q96E29 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
MTERF3Q96E29 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MTERF3Q96E29 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
MTERF3Q96E29 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MTERF3Q96E29 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MTERF3Q96E29 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MTERF3Q96E29 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MTERF3Q96E29 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MTERF3Q96E29 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.64■□□□□ 0.89
MTERF3Q96E29 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MTERF3Q96E29 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.64■□□□□ 0.89
MTERF3Q96E29 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.64■□□□□ 0.89
MTERF3Q96E29 AL512631.2-201ENST00000604634 923 ntBASIC20.64■□□□□ 0.89
MTERF3Q96E29 AC068587.7-201ENST00000641602 218 ntBASIC20.64■□□□□ 0.89
MTERF3Q96E29 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
MTERF3Q96E29 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.64■□□□□ 0.89
MTERF3Q96E29 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.64■□□□□ 0.89
MTERF3Q96E29 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.63■□□□□ 0.89
MTERF3Q96E29 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MTERF3Q96E29 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.63■□□□□ 0.89
MTERF3Q96E29 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTERF3Q96E29 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTERF3Q96E29 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTERF3Q96E29 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.63■□□□□ 0.89
MTERF3Q96E29 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.63■□□□□ 0.89
MTERF3Q96E29 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.63■□□□□ 0.89
MTERF3Q96E29 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MTERF3Q96E29 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms