Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
RAPGEF4Q8WZA2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC28.78■■■□□ 2.2
RAPGEF4Q8WZA2 MFSD11-216ENST00000590393 1141 ntBASIC28.78■■■□□ 2.2
RAPGEF4Q8WZA2 AC104187.1-201ENST00000607510 612 ntBASIC28.78■■■□□ 2.2
RAPGEF4Q8WZA2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
RAPGEF4Q8WZA2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
RAPGEF4Q8WZA2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC28.78■■■□□ 2.2
RAPGEF4Q8WZA2 KRT87P-202ENST00000534226 1464 ntBASIC28.78■■■□□ 2.2
RAPGEF4Q8WZA2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
RAPGEF4Q8WZA2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
RAPGEF4Q8WZA2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
RAPGEF4Q8WZA2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC28.77■■■□□ 2.2
RAPGEF4Q8WZA2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC28.77■■■□□ 2.2
RAPGEF4Q8WZA2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC28.76■■■□□ 2.2
RAPGEF4Q8WZA2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.76■■■□□ 2.19
RAPGEF4Q8WZA2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC28.76■■■□□ 2.19
RAPGEF4Q8WZA2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.76■■■□□ 2.19
RAPGEF4Q8WZA2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC28.76■■■□□ 2.19
RAPGEF4Q8WZA2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
RAPGEF4Q8WZA2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
RAPGEF4Q8WZA2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RAPGEF4Q8WZA2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
RAPGEF4Q8WZA2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
RAPGEF4Q8WZA2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
RAPGEF4Q8WZA2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC28.75■■■□□ 2.19
RAPGEF4Q8WZA2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
RAPGEF4Q8WZA2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RAPGEF4Q8WZA2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
RAPGEF4Q8WZA2 GPX1P1-201ENST00000388829 606 ntBASIC28.75■■■□□ 2.19
RAPGEF4Q8WZA2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC28.75■■■□□ 2.19
RAPGEF4Q8WZA2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
RAPGEF4Q8WZA2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
RAPGEF4Q8WZA2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC28.74■■■□□ 2.19
RAPGEF4Q8WZA2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
RAPGEF4Q8WZA2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC28.74■■■□□ 2.19
RAPGEF4Q8WZA2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
RAPGEF4Q8WZA2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
RAPGEF4Q8WZA2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
RAPGEF4Q8WZA2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
RAPGEF4Q8WZA2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
RAPGEF4Q8WZA2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC28.73■■■□□ 2.19
RAPGEF4Q8WZA2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
RAPGEF4Q8WZA2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
RAPGEF4Q8WZA2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
RAPGEF4Q8WZA2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC28.73■■■□□ 2.19
RAPGEF4Q8WZA2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RAPGEF4Q8WZA2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
RAPGEF4Q8WZA2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC28.73■■■□□ 2.19
RAPGEF4Q8WZA2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
RAPGEF4Q8WZA2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
RAPGEF4Q8WZA2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC28.73■■■□□ 2.19
RAPGEF4Q8WZA2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
RAPGEF4Q8WZA2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC28.72■■■□□ 2.19
RAPGEF4Q8WZA2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
RAPGEF4Q8WZA2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC28.72■■■□□ 2.19
RAPGEF4Q8WZA2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RAPGEF4Q8WZA2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
RAPGEF4Q8WZA2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC28.71■■■□□ 2.19
RAPGEF4Q8WZA2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RAPGEF4Q8WZA2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC28.71■■■□□ 2.19
RAPGEF4Q8WZA2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC28.71■■■□□ 2.19
RAPGEF4Q8WZA2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
RAPGEF4Q8WZA2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
RAPGEF4Q8WZA2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RAPGEF4Q8WZA2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
RAPGEF4Q8WZA2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC28.71■■■□□ 2.19
RAPGEF4Q8WZA2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC28.7■■■□□ 2.19
RAPGEF4Q8WZA2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC28.7■■■□□ 2.19
RAPGEF4Q8WZA2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
RAPGEF4Q8WZA2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.7■■■□□ 2.18
RAPGEF4Q8WZA2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC28.7■■■□□ 2.18
RAPGEF4Q8WZA2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
RAPGEF4Q8WZA2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
RAPGEF4Q8WZA2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
RAPGEF4Q8WZA2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC28.7■■■□□ 2.18
RAPGEF4Q8WZA2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RAPGEF4Q8WZA2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC28.69■■■□□ 2.18
RAPGEF4Q8WZA2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC28.69■■■□□ 2.18
RAPGEF4Q8WZA2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
RAPGEF4Q8WZA2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC28.69■■■□□ 2.18
RAPGEF4Q8WZA2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC28.69■■■□□ 2.18
RAPGEF4Q8WZA2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC28.69■■■□□ 2.18
RAPGEF4Q8WZA2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
RAPGEF4Q8WZA2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC28.69■■■□□ 2.18
RAPGEF4Q8WZA2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC28.69■■■□□ 2.18
RAPGEF4Q8WZA2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RAPGEF4Q8WZA2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
RAPGEF4Q8WZA2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC28.68■■■□□ 2.18
RAPGEF4Q8WZA2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC28.68■■■□□ 2.18
RAPGEF4Q8WZA2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 ABHD17AP1-201ENST00000358206 933 ntBASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms