Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.3■■□□□ 1
TRIM48Q8IWZ4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.3■■□□□ 1
TRIM48Q8IWZ4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM48Q8IWZ4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.3■■□□□ 1
TRIM48Q8IWZ4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.3■■□□□ 1
TRIM48Q8IWZ4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.3■■□□□ 1
TRIM48Q8IWZ4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.3■■□□□ 1
TRIM48Q8IWZ4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 AC012676.1-201ENST00000574705 1949 ntBASIC21.29■■□□□ 1
TRIM48Q8IWZ4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 DUSP8P3-201ENST00000399571 1760 ntBASIC21.29■■□□□ 1
TRIM48Q8IWZ4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM48Q8IWZ4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM48Q8IWZ4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TRIM48Q8IWZ4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.28■■□□□ 1
TRIM48Q8IWZ4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM48Q8IWZ4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM48Q8IWZ4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRIM48Q8IWZ4 AC027612.3-201ENST00000413684 1047 ntBASIC21.28■■□□□ 1
TRIM48Q8IWZ4 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.28■■□□□ 1
TRIM48Q8IWZ4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM48Q8IWZ4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
TRIM48Q8IWZ4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM48Q8IWZ4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.28■■□□□ 1
TRIM48Q8IWZ4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM48Q8IWZ4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRIM48Q8IWZ4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM48Q8IWZ4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.27■■□□□ 1
TRIM48Q8IWZ4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.27■■□□□ 1
TRIM48Q8IWZ4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.27■■□□□ 1
TRIM48Q8IWZ4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM48Q8IWZ4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.27■■□□□ 1
TRIM48Q8IWZ4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.27■■□□□ 1
TRIM48Q8IWZ4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM48Q8IWZ4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.27■■□□□ 1
TRIM48Q8IWZ4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.27■■□□□ 1
TRIM48Q8IWZ4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.27■■□□□ 1
TRIM48Q8IWZ4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TRIM48Q8IWZ4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM48Q8IWZ4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.27■□□□□ 0.99
TRIM48Q8IWZ4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM48Q8IWZ4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TRIM48Q8IWZ4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM48Q8IWZ4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM48Q8IWZ4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM48Q8IWZ4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM48Q8IWZ4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM48Q8IWZ4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM48Q8IWZ4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM48Q8IWZ4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM48Q8IWZ4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM48Q8IWZ4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM48Q8IWZ4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM48Q8IWZ4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM48Q8IWZ4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 LINC01960-201ENST00000563759 1884 ntBASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 AC123595.1-201ENST00000440769 1046 ntBASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 OXCT2P1-201ENST00000447263 1535 ntBASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM48Q8IWZ4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM48Q8IWZ4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms