Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LDB1Q86U70 AC008406.3-201ENST00000620001 1374 ntBASIC21.74■■□□□ 1.07
LDB1Q86U70 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB1Q86U70 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LDB1Q86U70 AC092053.2-201ENST00000640557 1818 ntBASIC21.73■■□□□ 1.07
LDB1Q86U70 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LDB1Q86U70 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.73■■□□□ 1.07
LDB1Q86U70 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.73■■□□□ 1.07
LDB1Q86U70 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LDB1Q86U70 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LDB1Q86U70 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
LDB1Q86U70 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.73■■□□□ 1.07
LDB1Q86U70 DUX4L19-201ENST00000557448 1267 ntBASIC21.73■■□□□ 1.07
LDB1Q86U70 AL031602.1-201ENST00000633169 911 ntBASIC21.73■■□□□ 1.07
LDB1Q86U70 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LDB1Q86U70 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.73■■□□□ 1.07
LDB1Q86U70 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
LDB1Q86U70 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LDB1Q86U70 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LDB1Q86U70 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB1Q86U70 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LDB1Q86U70 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB1Q86U70 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB1Q86U70 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB1Q86U70 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LDB1Q86U70 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB1Q86U70 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.72■■□□□ 1.07
LDB1Q86U70 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LDB1Q86U70 CA15P2-201ENST00000611168 834 ntBASIC21.72■■□□□ 1.07
LDB1Q86U70 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.72■■□□□ 1.07
LDB1Q86U70 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB1Q86U70 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB1Q86U70 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB1Q86U70 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.72■■□□□ 1.07
LDB1Q86U70 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LDB1Q86U70 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
LDB1Q86U70 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LDB1Q86U70 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.71■■□□□ 1.07
LDB1Q86U70 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LDB1Q86U70 UNC93B3-201ENST00000308076 687 ntBASIC21.71■■□□□ 1.07
LDB1Q86U70 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LDB1Q86U70 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LDB1Q86U70 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LDB1Q86U70 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.71■■□□□ 1.07
LDB1Q86U70 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.71■■□□□ 1.07
LDB1Q86U70 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LDB1Q86U70 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LDB1Q86U70 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LDB1Q86U70 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
LDB1Q86U70 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LDB1Q86U70 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LDB1Q86U70 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.7■■□□□ 1.06
LDB1Q86U70 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LDB1Q86U70 OR2I1P-207ENST00000453522 948 ntBASIC21.7■■□□□ 1.06
LDB1Q86U70 AL138724.1-201ENST00000606771 1088 ntBASIC21.7■■□□□ 1.06
LDB1Q86U70 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LDB1Q86U70 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.7■■□□□ 1.06
LDB1Q86U70 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LDB1Q86U70 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
LDB1Q86U70 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LDB1Q86U70 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.7■■□□□ 1.06
LDB1Q86U70 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LDB1Q86U70 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.7■■□□□ 1.06
LDB1Q86U70 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LDB1Q86U70 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LDB1Q86U70 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LDB1Q86U70 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LDB1Q86U70 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LDB1Q86U70 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LDB1Q86U70 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LDB1Q86U70 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.69■■□□□ 1.06
LDB1Q86U70 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.69■■□□□ 1.06
LDB1Q86U70 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.69■■□□□ 1.06
LDB1Q86U70 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.69■■□□□ 1.06
LDB1Q86U70 AC136469.2-201ENST00000623944 1028 ntBASIC21.69■■□□□ 1.06
LDB1Q86U70 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.69■■□□□ 1.06
LDB1Q86U70 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LDB1Q86U70 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LDB1Q86U70 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.69■■□□□ 1.06
LDB1Q86U70 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.69■■□□□ 1.06
LDB1Q86U70 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LDB1Q86U70 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LDB1Q86U70 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LDB1Q86U70 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LDB1Q86U70 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
LDB1Q86U70 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.68■■□□□ 1.06
LDB1Q86U70 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LDB1Q86U70 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
LDB1Q86U70 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.68■■□□□ 1.06
LDB1Q86U70 AC011298.3-201ENST00000615796 283 ntBASIC21.68■■□□□ 1.06
LDB1Q86U70 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.68■■□□□ 1.06
LDB1Q86U70 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LDB1Q86U70 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
LDB1Q86U70 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
LDB1Q86U70 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LDB1Q86U70 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LDB1Q86U70 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
LDB1Q86U70 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LDB1Q86U70 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LDB1Q86U70 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms