Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.13■■□□□ 1.29
LIMS2Q7Z4I7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 LINC02228-203ENST00000641970 1355 ntBASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
LIMS2Q7Z4I7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 DUX4L2-201ENST00000561772 1275 ntBASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 CCDC92B-201ENST00000575506 885 ntBASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 MIR5787-201ENST00000611784 55 ntBASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 DUX4L6-201ENST00000626483 1275 ntBASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 DUX4L1-201ENST00000627662 1275 ntBASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 DUX4L8-201ENST00000629013 1275 ntBASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 DUX4L3-201ENST00000630187 1275 ntBASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 DUX4L7-201ENST00000630678 1275 ntBASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 DUX4L5-201ENST00000630834 1275 ntBASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 AC127496.7-201ENST00000625110 1798 ntBASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LIMS2Q7Z4I7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LIMS2Q7Z4I7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LIMS2Q7Z4I7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.1■■□□□ 1.29
LIMS2Q7Z4I7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.1■■□□□ 1.29
LIMS2Q7Z4I7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
LIMS2Q7Z4I7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.1■■□□□ 1.29
LIMS2Q7Z4I7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LIMS2Q7Z4I7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
LIMS2Q7Z4I7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LIMS2Q7Z4I7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.1■■□□□ 1.29
LIMS2Q7Z4I7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
LIMS2Q7Z4I7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.09■■□□□ 1.29
LIMS2Q7Z4I7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
LIMS2Q7Z4I7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LIMS2Q7Z4I7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
LIMS2Q7Z4I7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
LIMS2Q7Z4I7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LIMS2Q7Z4I7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
LIMS2Q7Z4I7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.09■■□□□ 1.29
LIMS2Q7Z4I7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.09■■□□□ 1.29
LIMS2Q7Z4I7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LIMS2Q7Z4I7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LIMS2Q7Z4I7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.08■■□□□ 1.29
LIMS2Q7Z4I7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
LIMS2Q7Z4I7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.08■■□□□ 1.29
LIMS2Q7Z4I7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LIMS2Q7Z4I7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.08■■□□□ 1.29
LIMS2Q7Z4I7 AC139530.1-201ENST00000575312 1977 ntBASIC23.08■■□□□ 1.29
LIMS2Q7Z4I7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
LIMS2Q7Z4I7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
LIMS2Q7Z4I7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
LIMS2Q7Z4I7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.08■■□□□ 1.28
LIMS2Q7Z4I7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 AC034268.1-201ENST00000441047 882 ntBASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
LIMS2Q7Z4I7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LIMS2Q7Z4I7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LIMS2Q7Z4I7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.06■■□□□ 1.28
LIMS2Q7Z4I7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LIMS2Q7Z4I7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
LIMS2Q7Z4I7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.06■■□□□ 1.28
LIMS2Q7Z4I7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.06■■□□□ 1.28
LIMS2Q7Z4I7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms