Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CASC1Q6TDU7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CASC1Q6TDU7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.55■■□□□ 1.84
CASC1Q6TDU7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CASC1Q6TDU7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CASC1Q6TDU7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CASC1Q6TDU7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CASC1Q6TDU7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CASC1Q6TDU7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CASC1Q6TDU7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC26.54■■□□□ 1.84
CASC1Q6TDU7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CASC1Q6TDU7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CASC1Q6TDU7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CASC1Q6TDU7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CASC1Q6TDU7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
CASC1Q6TDU7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CASC1Q6TDU7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CASC1Q6TDU7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CASC1Q6TDU7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CASC1Q6TDU7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CASC1Q6TDU7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CASC1Q6TDU7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CASC1Q6TDU7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CASC1Q6TDU7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CASC1Q6TDU7 MIR3621-201ENST00000580529 85 ntBASIC26.52■■□□□ 1.84
CASC1Q6TDU7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.52■■□□□ 1.84
CASC1Q6TDU7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
CASC1Q6TDU7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CASC1Q6TDU7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
CASC1Q6TDU7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.51■■□□□ 1.83
CASC1Q6TDU7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.51■■□□□ 1.83
CASC1Q6TDU7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.51■■□□□ 1.83
CASC1Q6TDU7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CASC1Q6TDU7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CASC1Q6TDU7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CASC1Q6TDU7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 AC133637.1-201ENST00000624115 1537 ntBASIC26.5■■□□□ 1.83
CASC1Q6TDU7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 pRNA.6-201ENST00000610482 90 ntBASIC26.5■■□□□ 1.83
CASC1Q6TDU7 pRNA.5-201ENST00000612139 90 ntBASIC26.5■■□□□ 1.83
CASC1Q6TDU7 pRNA.11-201ENST00000618423 90 ntBASIC26.5■■□□□ 1.83
CASC1Q6TDU7 pRNA.13-201ENST00000619112 90 ntBASIC26.5■■□□□ 1.83
CASC1Q6TDU7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.5■■□□□ 1.83
CASC1Q6TDU7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CASC1Q6TDU7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CASC1Q6TDU7 FBXW4P1-201ENST00000426721 2239 ntBASIC26.49■■□□□ 1.83
CASC1Q6TDU7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.49■■□□□ 1.83
CASC1Q6TDU7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CASC1Q6TDU7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CASC1Q6TDU7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.49■■□□□ 1.83
CASC1Q6TDU7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CASC1Q6TDU7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CASC1Q6TDU7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CASC1Q6TDU7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CASC1Q6TDU7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
CASC1Q6TDU7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CASC1Q6TDU7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC26.48■■□□□ 1.83
CASC1Q6TDU7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CASC1Q6TDU7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CASC1Q6TDU7 AC099791.2-201ENST00000605725 427 ntBASIC26.48■■□□□ 1.83
CASC1Q6TDU7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CASC1Q6TDU7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CASC1Q6TDU7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC26.48■■□□□ 1.83
CASC1Q6TDU7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC26.48■■□□□ 1.83
CASC1Q6TDU7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.48■■□□□ 1.83
CASC1Q6TDU7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CASC1Q6TDU7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
CASC1Q6TDU7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CASC1Q6TDU7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.47■■□□□ 1.83
CASC1Q6TDU7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CASC1Q6TDU7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.47■■□□□ 1.83
CASC1Q6TDU7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CASC1Q6TDU7 AC006455.2-201ENST00000429931 906 ntBASIC26.47■■□□□ 1.83
CASC1Q6TDU7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.47■■□□□ 1.83
CASC1Q6TDU7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.47■■□□□ 1.83
CASC1Q6TDU7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.47■■□□□ 1.83
CASC1Q6TDU7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.47■■□□□ 1.83
CASC1Q6TDU7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CASC1Q6TDU7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CASC1Q6TDU7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CASC1Q6TDU7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.46■■□□□ 1.83
CASC1Q6TDU7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.46■■□□□ 1.83
CASC1Q6TDU7 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.46■■□□□ 1.83
CASC1Q6TDU7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
CASC1Q6TDU7 AC092171.4-201ENST00000609130 632 ntBASIC26.46■■□□□ 1.83
CASC1Q6TDU7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
CASC1Q6TDU7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CASC1Q6TDU7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms