Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.78■□□□□ 0.76
SMARCD3Q6STE5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD3Q6STE5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.78■□□□□ 0.76
SMARCD3Q6STE5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD3Q6STE5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD3Q6STE5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD3Q6STE5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SMARCD3Q6STE5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD3Q6STE5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMARCD3Q6STE5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 TSPY9P-201ENST00000440215 945 ntBASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 TSPY11P-201ENST00000442607 1045 ntBASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 RARRES2P1-201ENST00000474487 481 ntBASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.77■□□□□ 0.76
SMARCD3Q6STE5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SMARCD3Q6STE5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMARCD3Q6STE5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SMARCD3Q6STE5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMARCD3Q6STE5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD3Q6STE5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 CA15P2-201ENST00000611168 834 ntBASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD3Q6STE5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
SMARCD3Q6STE5 AC009299.2-201ENST00000482477 511 ntBASIC19.74■□□□□ 0.75
SMARCD3Q6STE5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.74■□□□□ 0.75
SMARCD3Q6STE5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD3Q6STE5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.74■□□□□ 0.75
SMARCD3Q6STE5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.74■□□□□ 0.75
SMARCD3Q6STE5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD3Q6STE5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD3Q6STE5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD3Q6STE5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD3Q6STE5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD3Q6STE5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD3Q6STE5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD3Q6STE5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SMARCD3Q6STE5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD3Q6STE5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD3Q6STE5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.73■□□□□ 0.75
SMARCD3Q6STE5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD3Q6STE5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD3Q6STE5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD3Q6STE5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD3Q6STE5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD3Q6STE5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD3Q6STE5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD3Q6STE5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD3Q6STE5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
SMARCD3Q6STE5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD3Q6STE5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCD3Q6STE5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD3Q6STE5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.72■□□□□ 0.75
SMARCD3Q6STE5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMARCD3Q6STE5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.72■□□□□ 0.75
SMARCD3Q6STE5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.72■□□□□ 0.75
SMARCD3Q6STE5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.71■□□□□ 0.75
SMARCD3Q6STE5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.71■□□□□ 0.75
SMARCD3Q6STE5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMARCD3Q6STE5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms