Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
VARS2Q5ST30 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
VARS2Q5ST30 AC093323.1-202ENST00000635031 2045 ntBASIC23.15■■□□□ 1.3
VARS2Q5ST30 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.15■■□□□ 1.3
VARS2Q5ST30 AP004607.4-201ENST00000530158 1459 ntBASIC23.15■■□□□ 1.3
VARS2Q5ST30 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VARS2Q5ST30 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
VARS2Q5ST30 LINC01960-201ENST00000563759 1884 ntBASIC23.15■■□□□ 1.3
VARS2Q5ST30 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
VARS2Q5ST30 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VARS2Q5ST30 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.3
VARS2Q5ST30 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
VARS2Q5ST30 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.14■■□□□ 1.29
VARS2Q5ST30 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.14■■□□□ 1.29
VARS2Q5ST30 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.14■■□□□ 1.29
VARS2Q5ST30 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.14■■□□□ 1.29
VARS2Q5ST30 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.14■■□□□ 1.29
VARS2Q5ST30 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.14■■□□□ 1.29
VARS2Q5ST30 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VARS2Q5ST30 AC004854.2-201ENST00000608450 1441 ntBASIC23.14■■□□□ 1.29
VARS2Q5ST30 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
VARS2Q5ST30 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
VARS2Q5ST30 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VARS2Q5ST30 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VARS2Q5ST30 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.13■■□□□ 1.29
VARS2Q5ST30 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VARS2Q5ST30 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
VARS2Q5ST30 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VARS2Q5ST30 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.13■■□□□ 1.29
VARS2Q5ST30 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.13■■□□□ 1.29
VARS2Q5ST30 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
VARS2Q5ST30 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VARS2Q5ST30 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
VARS2Q5ST30 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VARS2Q5ST30 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VARS2Q5ST30 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VARS2Q5ST30 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
VARS2Q5ST30 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
VARS2Q5ST30 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.12■■□□□ 1.29
VARS2Q5ST30 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
VARS2Q5ST30 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VARS2Q5ST30 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.12■■□□□ 1.29
VARS2Q5ST30 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VARS2Q5ST30 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
VARS2Q5ST30 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VARS2Q5ST30 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.11■■□□□ 1.29
VARS2Q5ST30 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VARS2Q5ST30 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VARS2Q5ST30 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VARS2Q5ST30 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.11■■□□□ 1.29
VARS2Q5ST30 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.11■■□□□ 1.29
VARS2Q5ST30 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.11■■□□□ 1.29
VARS2Q5ST30 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VARS2Q5ST30 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
VARS2Q5ST30 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
VARS2Q5ST30 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
VARS2Q5ST30 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
VARS2Q5ST30 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.1■■□□□ 1.29
VARS2Q5ST30 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.1■■□□□ 1.29
VARS2Q5ST30 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VARS2Q5ST30 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.1■■□□□ 1.29
VARS2Q5ST30 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
VARS2Q5ST30 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
VARS2Q5ST30 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VARS2Q5ST30 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.09■■□□□ 1.29
VARS2Q5ST30 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.09■■□□□ 1.29
VARS2Q5ST30 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.09■■□□□ 1.29
VARS2Q5ST30 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
VARS2Q5ST30 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VARS2Q5ST30 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
VARS2Q5ST30 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
VARS2Q5ST30 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
VARS2Q5ST30 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
VARS2Q5ST30 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
VARS2Q5ST30 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.08■■□□□ 1.29
VARS2Q5ST30 AC006015.1-201ENST00000429970 570 ntBASIC23.08■■□□□ 1.29
VARS2Q5ST30 AC079140.4-201ENST00000507448 529 ntBASIC23.08■■□□□ 1.29
VARS2Q5ST30 AC137761.2-201ENST00000561729 223 ntBASIC23.08■■□□□ 1.29
VARS2Q5ST30 AC145350.3-201ENST00000569033 163 ntBASIC23.08■■□□□ 1.29
VARS2Q5ST30 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.08■■□□□ 1.29
VARS2Q5ST30 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.08■■□□□ 1.29
VARS2Q5ST30 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
VARS2Q5ST30 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
VARS2Q5ST30 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
VARS2Q5ST30 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.07■■□□□ 1.28
VARS2Q5ST30 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VARS2Q5ST30 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.07■■□□□ 1.28
VARS2Q5ST30 AC005224.4-201ENST00000583262 1652 ntBASIC23.07■■□□□ 1.28
VARS2Q5ST30 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
VARS2Q5ST30 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VARS2Q5ST30 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.07■■□□□ 1.28
VARS2Q5ST30 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.07■■□□□ 1.28
VARS2Q5ST30 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.07■■□□□ 1.28
VARS2Q5ST30 AC079089.2-201ENST00000531211 1277 ntBASIC23.07■■□□□ 1.28
VARS2Q5ST30 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.07■■□□□ 1.28
VARS2Q5ST30 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
VARS2Q5ST30 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VARS2Q5ST30 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
VARS2Q5ST30 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.06■■□□□ 1.28
VARS2Q5ST30 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms