Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.94■□□□□ 0.94
HMGCS1Q01581 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.94■□□□□ 0.94
HMGCS1Q01581 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
HMGCS1Q01581 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.94■□□□□ 0.94
HMGCS1Q01581 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCS1Q01581 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCS1Q01581 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HMGCS1Q01581 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMGCS1Q01581 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS1Q01581 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS1Q01581 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS1Q01581 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS1Q01581 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HMGCS1Q01581 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS1Q01581 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.93■□□□□ 0.94
HMGCS1Q01581 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
HMGCS1Q01581 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS1Q01581 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS1Q01581 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.93■□□□□ 0.94
HMGCS1Q01581 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS1Q01581 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS1Q01581 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS1Q01581 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGCS1Q01581 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGCS1Q01581 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGCS1Q01581 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
HMGCS1Q01581 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS1Q01581 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HMGCS1Q01581 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCS1Q01581 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS1Q01581 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.92■□□□□ 0.94
HMGCS1Q01581 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGCS1Q01581 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HMGCS1Q01581 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS1Q01581 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS1Q01581 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGCS1Q01581 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS1Q01581 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HMGCS1Q01581 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
HMGCS1Q01581 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.92■□□□□ 0.94
HMGCS1Q01581 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
HMGCS1Q01581 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCS1Q01581 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGCS1Q01581 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS1Q01581 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS1Q01581 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS1Q01581 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS1Q01581 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS1Q01581 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HMGCS1Q01581 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGCS1Q01581 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS1Q01581 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGCS1Q01581 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCS1Q01581 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.91■□□□□ 0.94
HMGCS1Q01581 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS1Q01581 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS1Q01581 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGCS1Q01581 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGCS1Q01581 MIR3181-201ENST00000578512 73 ntBASIC20.9■□□□□ 0.94
HMGCS1Q01581 AL512631.2-201ENST00000604634 923 ntBASIC20.9■□□□□ 0.94
HMGCS1Q01581 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS1Q01581 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS1Q01581 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCS1Q01581 AC010542.4-201ENST00000563151 1910 ntBASIC20.9■□□□□ 0.94
HMGCS1Q01581 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HMGCS1Q01581 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
HMGCS1Q01581 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
HMGCS1Q01581 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.89■□□□□ 0.94
HMGCS1Q01581 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGCS1Q01581 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGCS1Q01581 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.89■□□□□ 0.94
HMGCS1Q01581 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCS1Q01581 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCS1Q01581 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCS1Q01581 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.89■□□□□ 0.93
HMGCS1Q01581 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HMGCS1Q01581 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCS1Q01581 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCS1Q01581 SRD5A1P1-201ENST00000442297 786 ntBASIC20.89■□□□□ 0.93
HMGCS1Q01581 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCS1Q01581 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCS1Q01581 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCS1Q01581 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCS1Q01581 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCS1Q01581 AL137060.1-201ENST00000618151 2648 ntBASIC20.88■□□□□ 0.93
HMGCS1Q01581 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.88■□□□□ 0.93
HMGCS1Q01581 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCS1Q01581 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCS1Q01581 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCS1Q01581 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCS1Q01581 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.88■□□□□ 0.93
HMGCS1Q01581 AL031602.1-201ENST00000633169 911 ntBASIC20.88■□□□□ 0.93
HMGCS1Q01581 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.88■□□□□ 0.93
HMGCS1Q01581 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HMGCS1Q01581 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCS1Q01581 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCS1Q01581 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCS1Q01581 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCS1Q01581 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCS1Q01581 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms