Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A1P61619 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.9■□□□□ 0.62
SEC61A1P61619 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A1P61619 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A1P61619 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SEC61A1P61619 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SEC61A1P61619 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.9■□□□□ 0.62
SEC61A1P61619 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A1P61619 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.9■□□□□ 0.62
SEC61A1P61619 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A1P61619 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A1P61619 SRD5A1P1-201ENST00000442297 786 ntBASIC18.9■□□□□ 0.62
SEC61A1P61619 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A1P61619 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.9■□□□□ 0.62
SEC61A1P61619 AC019069.1-201ENST00000610008 1333 ntBASIC18.9■□□□□ 0.62
SEC61A1P61619 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A1P61619 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A1P61619 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.9■□□□□ 0.62
SEC61A1P61619 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SEC61A1P61619 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.89■□□□□ 0.62
SEC61A1P61619 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A1P61619 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.89■□□□□ 0.61
SEC61A1P61619 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A1P61619 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.89■□□□□ 0.61
SEC61A1P61619 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.89■□□□□ 0.61
SEC61A1P61619 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.89■□□□□ 0.61
SEC61A1P61619 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A1P61619 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SEC61A1P61619 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.89■□□□□ 0.61
SEC61A1P61619 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SEC61A1P61619 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A1P61619 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A1P61619 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEC61A1P61619 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.88■□□□□ 0.61
SEC61A1P61619 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 MIR638-201ENST00000385237 100 ntBASIC18.88■□□□□ 0.61
SEC61A1P61619 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.88■□□□□ 0.61
SEC61A1P61619 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SEC61A1P61619 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.88■□□□□ 0.61
SEC61A1P61619 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.88■□□□□ 0.61
SEC61A1P61619 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SEC61A1P61619 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SEC61A1P61619 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.88■□□□□ 0.61
SEC61A1P61619 AC009102.2-201ENST00000606772 1639 ntBASIC18.88■□□□□ 0.61
SEC61A1P61619 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.88■□□□□ 0.61
SEC61A1P61619 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEC61A1P61619 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A1P61619 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A1P61619 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A1P61619 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SEC61A1P61619 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.87■□□□□ 0.61
SEC61A1P61619 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A1P61619 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.87■□□□□ 0.61
SEC61A1P61619 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.87■□□□□ 0.61
SEC61A1P61619 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.87■□□□□ 0.61
SEC61A1P61619 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.87■□□□□ 0.61
SEC61A1P61619 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEC61A1P61619 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
SEC61A1P61619 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A1P61619 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A1P61619 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A1P61619 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SEC61A1P61619 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A1P61619 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SEC61A1P61619 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.86■□□□□ 0.61
SEC61A1P61619 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A1P61619 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A1P61619 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEC61A1P61619 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SEC61A1P61619 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A1P61619 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A1P61619 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A1P61619 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A1P61619 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A1P61619 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SEC61A1P61619 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A1P61619 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A1P61619 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A1P61619 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A1P61619 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SEC61A1P61619 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A1P61619 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A1P61619 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A1P61619 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEC61A1P61619 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SEC61A1P61619 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms