Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RARRES2P6-201ENST00000567333 442 ntBASIC20.81■□□□□ 0.92
VSX2P58304 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VSX2P58304 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.81■□□□□ 0.92
VSX2P58304 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.81■□□□□ 0.92
VSX2P58304 MIR6084-201ENST00000622012 110 ntBASIC20.81■□□□□ 0.92
VSX2P58304 AL358852.1-201ENST00000623174 1268 ntBASIC20.81■□□□□ 0.92
VSX2P58304 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
VSX2P58304 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VSX2P58304 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VSX2P58304 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VSX2P58304 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
VSX2P58304 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.8■□□□□ 0.92
VSX2P58304 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.8■□□□□ 0.92
VSX2P58304 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.8■□□□□ 0.92
VSX2P58304 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VSX2P58304 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VSX2P58304 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VSX2P58304 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VSX2P58304 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VSX2P58304 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.79■□□□□ 0.92
VSX2P58304 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.79■□□□□ 0.92
VSX2P58304 OXCT2P1-201ENST00000447263 1535 ntBASIC20.79■□□□□ 0.92
VSX2P58304 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VSX2P58304 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VSX2P58304 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.79■□□□□ 0.92
VSX2P58304 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.79■□□□□ 0.92
VSX2P58304 AC012676.1-201ENST00000574705 1949 ntBASIC20.79■□□□□ 0.92
VSX2P58304 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
VSX2P58304 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VSX2P58304 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.79■□□□□ 0.92
VSX2P58304 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.79■□□□□ 0.92
VSX2P58304 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
VSX2P58304 AL354811.1-201ENST00000610286 706 ntBASIC20.79■□□□□ 0.92
VSX2P58304 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.79■□□□□ 0.92
VSX2P58304 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VSX2P58304 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VSX2P58304 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VSX2P58304 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.78■□□□□ 0.92
VSX2P58304 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSX2P58304 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
VSX2P58304 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSX2P58304 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
VSX2P58304 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
VSX2P58304 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.78■□□□□ 0.92
VSX2P58304 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSX2P58304 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.78■□□□□ 0.92
VSX2P58304 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSX2P58304 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.78■□□□□ 0.92
VSX2P58304 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSX2P58304 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSX2P58304 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
VSX2P58304 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.77■□□□□ 0.92
VSX2P58304 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.77■□□□□ 0.92
VSX2P58304 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VSX2P58304 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VSX2P58304 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VSX2P58304 AC026271.2-201ENST00000428091 497 ntBASIC20.77■□□□□ 0.92
VSX2P58304 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
VSX2P58304 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VSX2P58304 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VSX2P58304 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VSX2P58304 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VSX2P58304 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.76■□□□□ 0.91
VSX2P58304 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VSX2P58304 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VSX2P58304 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
VSX2P58304 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.76■□□□□ 0.91
VSX2P58304 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VSX2P58304 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VSX2P58304 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.76■□□□□ 0.91
VSX2P58304 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VSX2P58304 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.76■□□□□ 0.91
VSX2P58304 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.76■□□□□ 0.91
VSX2P58304 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
VSX2P58304 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VSX2P58304 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
VSX2P58304 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
VSX2P58304 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
VSX2P58304 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSX2P58304 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSX2P58304 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSX2P58304 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSX2P58304 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSX2P58304 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VSX2P58304 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VSX2P58304 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VSX2P58304 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.75■□□□□ 0.91
VSX2P58304 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.75■□□□□ 0.91
VSX2P58304 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.75■□□□□ 0.91
VSX2P58304 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSX2P58304 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSX2P58304 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSX2P58304 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.75■□□□□ 0.91
VSX2P58304 C1orf229-201ENST00000623686 2258 ntBASIC20.75■□□□□ 0.91
VSX2P58304 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSX2P58304 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.75■□□□□ 0.91
VSX2P58304 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VSX2P58304 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
VSX2P58304 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VSX2P58304 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms