Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB38P57729 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB38P57729 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB38P57729 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.49■□□□□ 0.87
RAB38P57729 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RAB38P57729 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB38P57729 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB38P57729 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB38P57729 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB38P57729 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB38P57729 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.49■□□□□ 0.87
RAB38P57729 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB38P57729 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB38P57729 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB38P57729 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB38P57729 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB38P57729 AC233723.2-201ENST00000623798 2106 ntBASIC20.48■□□□□ 0.87
RAB38P57729 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB38P57729 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB38P57729 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB38P57729 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB38P57729 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
RAB38P57729 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB38P57729 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB38P57729 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB38P57729 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB38P57729 AC019069.1-201ENST00000610008 1333 ntBASIC20.48■□□□□ 0.87
RAB38P57729 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB38P57729 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.48■□□□□ 0.87
RAB38P57729 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB38P57729 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB38P57729 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB38P57729 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB38P57729 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB38P57729 IRS3P-201ENST00000223076 1006 ntBASIC20.47■□□□□ 0.87
RAB38P57729 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAB38P57729 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB38P57729 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAB38P57729 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB38P57729 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB38P57729 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB38P57729 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAB38P57729 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.47■□□□□ 0.87
RAB38P57729 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
RAB38P57729 AC139530.1-201ENST00000575312 1977 ntBASIC20.46■□□□□ 0.87
RAB38P57729 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB38P57729 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB38P57729 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB38P57729 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB38P57729 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.46■□□□□ 0.87
RAB38P57729 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.46■□□□□ 0.87
RAB38P57729 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB38P57729 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB38P57729 AC133561.1-201ENST00000568600 2415 ntBASIC20.46■□□□□ 0.87
RAB38P57729 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB38P57729 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
RAB38P57729 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB38P57729 ZNRF2P3-201ENST00000424200 374 ntBASIC20.45■□□□□ 0.86
RAB38P57729 AC105233.4-201ENST00000642045 216 ntBASIC20.45■□□□□ 0.86
RAB38P57729 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB38P57729 LINC00526-201ENST00000581067 1875 ntBASIC20.45■□□□□ 0.86
RAB38P57729 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB38P57729 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB38P57729 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB38P57729 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.44■□□□□ 0.86
RAB38P57729 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB38P57729 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.44■□□□□ 0.86
RAB38P57729 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB38P57729 AC080038.3-201ENST00000623346 1952 ntBASIC20.44■□□□□ 0.86
RAB38P57729 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB38P57729 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB38P57729 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB38P57729 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RAB38P57729 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB38P57729 OR7E47P-201ENST00000546390 1422 ntBASIC20.44■□□□□ 0.86
RAB38P57729 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB38P57729 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB38P57729 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB38P57729 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB38P57729 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RAB38P57729 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.43■□□□□ 0.86
RAB38P57729 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB38P57729 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB38P57729 SMUG1P1-201ENST00000590640 811 ntBASIC20.43■□□□□ 0.86
RAB38P57729 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RAB38P57729 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB38P57729 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB38P57729 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB38P57729 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB38P57729 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB38P57729 GUSBP5-202ENST00000510805 1989 ntBASIC20.43■□□□□ 0.86
RAB38P57729 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB38P57729 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.42■□□□□ 0.86
RAB38P57729 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RAB38P57729 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB38P57729 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
RAB38P57729 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.42■□□□□ 0.86
RAB38P57729 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB38P57729 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB38P57729 AC012414.1-201ENST00000556676 535 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms