Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.29■□□□□ 0.84
SMSP52788 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SMSP52788 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMSP52788 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.28■□□□□ 0.84
SMSP52788 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.28■□□□□ 0.84
SMSP52788 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMSP52788 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.28■□□□□ 0.84
SMSP52788 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMSP52788 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.28■□□□□ 0.84
SMSP52788 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMSP52788 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.28■□□□□ 0.84
SMSP52788 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMSP52788 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMSP52788 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMSP52788 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMSP52788 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMSP52788 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SMSP52788 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMSP52788 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMSP52788 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMSP52788 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
SMSP52788 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMSP52788 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.27■□□□□ 0.84
SMSP52788 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.27■□□□□ 0.84
SMSP52788 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.27■□□□□ 0.84
SMSP52788 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMSP52788 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMSP52788 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMSP52788 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMSP52788 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SMSP52788 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMSP52788 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.26■□□□□ 0.83
SMSP52788 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMSP52788 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.26■□□□□ 0.83
SMSP52788 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SMSP52788 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMSP52788 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
SMSP52788 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMSP52788 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMSP52788 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMSP52788 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.26■□□□□ 0.83
SMSP52788 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMSP52788 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.25■□□□□ 0.83
SMSP52788 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMSP52788 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
SMSP52788 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMSP52788 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMSP52788 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SMSP52788 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMSP52788 AC009102.2-201ENST00000606772 1639 ntBASIC20.25■□□□□ 0.83
SMSP52788 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SMSP52788 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMSP52788 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMSP52788 AC136469.2-201ENST00000623944 1028 ntBASIC20.25■□□□□ 0.83
SMSP52788 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMSP52788 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMSP52788 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMSP52788 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMSP52788 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMSP52788 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SMSP52788 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMSP52788 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMSP52788 AL353803.4-201ENST00000565882 1934 ntBASIC20.24■□□□□ 0.83
SMSP52788 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMSP52788 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.24■□□□□ 0.83
SMSP52788 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.24■□□□□ 0.83
SMSP52788 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.24■□□□□ 0.83
SMSP52788 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.24■□□□□ 0.83
SMSP52788 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMSP52788 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMSP52788 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SMSP52788 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMSP52788 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SMSP52788 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.23■□□□□ 0.83
SMSP52788 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMSP52788 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.23■□□□□ 0.83
SMSP52788 AC233992.3-201ENST00000607491 485 ntBASIC20.23■□□□□ 0.83
SMSP52788 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SMSP52788 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.22■□□□□ 0.83
SMSP52788 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.22■□□□□ 0.83
SMSP52788 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.22■□□□□ 0.83
SMSP52788 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.22■□□□□ 0.83
SMSP52788 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.22■□□□□ 0.83
SMSP52788 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SMSP52788 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.22■□□□□ 0.83
SMSP52788 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.22■□□□□ 0.83
SMSP52788 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SMSP52788 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMSP52788 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.22■□□□□ 0.83
SMSP52788 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 573.4 ms