Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CENPAP49450 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPAP49450 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPAP49450 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.59■□□□□ 0.73
CENPAP49450 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPAP49450 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
CENPAP49450 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CENPAP49450 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPAP49450 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPAP49450 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.59■□□□□ 0.73
CENPAP49450 KRT16P3-201ENST00000439127 1283 ntBASIC19.59■□□□□ 0.73
CENPAP49450 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.59■□□□□ 0.73
CENPAP49450 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CENPAP49450 MIR6724-1-201ENST00000616420 92 ntBASIC19.59■□□□□ 0.73
CENPAP49450 MIR6724-2-201ENST00000616483 92 ntBASIC19.59■□□□□ 0.73
CENPAP49450 MIR6724-4-201ENST00000617390 92 ntBASIC19.59■□□□□ 0.73
CENPAP49450 MIR6724-3-201ENST00000622482 92 ntBASIC19.59■□□□□ 0.73
CENPAP49450 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.59■□□□□ 0.73
CENPAP49450 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPAP49450 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CENPAP49450 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.59■□□□□ 0.73
CENPAP49450 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CENPAP49450 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CENPAP49450 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.59■□□□□ 0.73
CENPAP49450 AC004687.1-201ENST00000579003 1625 ntBASIC19.58■□□□□ 0.73
CENPAP49450 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CENPAP49450 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CENPAP49450 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CENPAP49450 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CENPAP49450 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.58■□□□□ 0.73
CENPAP49450 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.58■□□□□ 0.73
CENPAP49450 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CENPAP49450 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.58■□□□□ 0.72
CENPAP49450 AC087742.1-201ENST00000575880 1738 ntBASIC19.58■□□□□ 0.72
CENPAP49450 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CENPAP49450 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.58■□□□□ 0.72
CENPAP49450 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CENPAP49450 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CENPAP49450 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CENPAP49450 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CENPAP49450 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CENPAP49450 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPAP49450 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CENPAP49450 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPAP49450 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPAP49450 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPAP49450 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.57■□□□□ 0.72
CENPAP49450 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPAP49450 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPAP49450 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CENPAP49450 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPAP49450 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.57■□□□□ 0.72
CENPAP49450 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPAP49450 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPAP49450 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPAP49450 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPAP49450 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CENPAP49450 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPAP49450 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPAP49450 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CENPAP49450 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPAP49450 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPAP49450 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPAP49450 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.56■□□□□ 0.72
CENPAP49450 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPAP49450 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPAP49450 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.56■□□□□ 0.72
CENPAP49450 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.56■□□□□ 0.72
CENPAP49450 AL117332.1-201ENST00000622628 974 ntBASIC19.56■□□□□ 0.72
CENPAP49450 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPAP49450 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPAP49450 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPAP49450 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPAP49450 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CENPAP49450 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CENPAP49450 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CENPAP49450 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CENPAP49450 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.56■□□□□ 0.72
CENPAP49450 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CENPAP49450 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPAP49450 AC139530.1-201ENST00000575312 1977 ntBASIC19.55■□□□□ 0.72
CENPAP49450 AC080038.3-201ENST00000623346 1952 ntBASIC19.55■□□□□ 0.72
CENPAP49450 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPAP49450 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPAP49450 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPAP49450 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CENPAP49450 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPAP49450 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPAP49450 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CENPAP49450 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPAP49450 LINC01960-201ENST00000563759 1884 ntBASIC19.55■□□□□ 0.72
CENPAP49450 AL035685.1-201ENST00000636663 812 ntBASIC19.55■□□□□ 0.72
CENPAP49450 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPAP49450 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPAP49450 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPAP49450 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.54■□□□□ 0.72
CENPAP49450 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.54■□□□□ 0.72
CENPAP49450 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPAP49450 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPAP49450 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms