Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 TRM13YOL125W 1431 nt3.94□□□□□ -1.78
RPH1P39956 POL12YBL035C 2118 nt3.94□□□□□ -1.78
RPH1P39956 YCR015CYCR015C 954 nt3.93□□□□□ -1.78
RPH1P39956 YCR100CYCR100C 951 nt3.93□□□□□ -1.78
RPH1P39956 YDL186WYDL186W 834 nt3.93□□□□□ -1.78
RPH1P39956 YDR230WYDR230W 348 nt3.93□□□□□ -1.78
RPH1P39956 COX4YGL187C 468 nt3.93□□□□□ -1.78
RPH1P39956 CPR3YML078W 549 nt3.93□□□□□ -1.78
RPH1P39956 TAF3YPL011C 1062 nt3.93□□□□□ -1.78
RPH1P39956 snR189snR189 189 nt3.93□□□□□ -1.78
RPH1P39956 BMH1YER177W 804 nt3.92□□□□□ -1.78
RPH1P39956 YGR079WYGR079W 1113 nt3.92□□□□□ -1.78
RPH1P39956 YGR149WYGR149W 1299 nt3.92□□□□□ -1.78
RPH1P39956 FUR1YHR128W 651 nt3.92□□□□□ -1.78
RPH1P39956 GVP36YIL041W 981 nt3.92□□□□□ -1.78
RPH1P39956 OAR1YKL055C 837 nt3.92□□□□□ -1.78
RPH1P39956 YAL066WYAL066W 309 nt3.92□□□□□ -1.78
RPH1P39956 YBL062WYBL062W 381 nt3.92□□□□□ -1.78
RPH1P39956 YNL162W-AYNL162W-A 219 nt3.92□□□□□ -1.78
RPH1P39956 YOL118CYOL118C 309 nt3.92□□□□□ -1.78
RPH1P39956 PNT1YOR266W 1272 nt3.92□□□□□ -1.78
RPH1P39956 IDI1YPL117C 867 nt3.92□□□□□ -1.78
RPH1P39956 SHE3YBR130C 1278 nt3.92□□□□□ -1.78
RPH1P39956 CNS1YBR155W 1158 nt3.92□□□□□ -1.78
RPH1P39956 YBR219CYBR219C 384 nt3.92□□□□□ -1.78
RPH1P39956 FKH2YNL068C 2589 nt3.92□□□□□ -1.78
RPH1P39956 OCT1YKL134C 2319 nt3.92□□□□□ -1.78
RPH1P39956 RSC3YDR303C 2658 nt3.91□□□□□ -1.78
RPH1P39956 RRP8YDR083W 1179 nt3.91□□□□□ -1.78
RPH1P39956 YDR133CYDR133C 336 nt3.91□□□□□ -1.78
RPH1P39956 NBP2YDR162C 711 nt3.91□□□□□ -1.78
RPH1P39956 YEL050W-AYEL050W-A 192 nt3.91□□□□□ -1.78
RPH1P39956 VPS45YGL095C 1734 nt3.91□□□□□ -1.78
RPH1P39956 NSE1YLR007W 1011 nt3.91□□□□□ -1.78
RPH1P39956 IES3YLR052W 753 nt3.91□□□□□ -1.78
RPH1P39956 YLR307C-AYLR307C-A 264 nt3.91□□□□□ -1.78
RPH1P39956 YML116W-AYML116W-A 303 nt3.91□□□□□ -1.78
RPH1P39956 TPP1YMR156C 717 nt3.91□□□□□ -1.78
RPH1P39956 YPT53YNL093W 663 nt3.91□□□□□ -1.78
RPH1P39956 YNR061CYNR061C 660 nt3.91□□□□□ -1.78
RPH1P39956 OSW1YOR255W 837 nt3.91□□□□□ -1.78
RPH1P39956 HMG1YML075C 3165 nt3.91□□□□□ -1.78
RPH1P39956 GAS5YOL030W 1455 nt3.91□□□□□ -1.78
RPH1P39956 BCK2YER167W 2556 nt3.91□□□□□ -1.78
RPH1P39956 FAA1YOR317W 2103 nt3.91□□□□□ -1.78
RPH1P39956 TRM1YDR120C 1713 nt3.9□□□□□ -1.78
RPH1P39956 MDM38YOL027C 1722 nt3.9□□□□□ -1.78
RPH1P39956 Q0255Q0255 1419 nt3.9□□□□□ -1.78
RPH1P39956 FAS2YPL231W 5664 nt3.9□□□□□ -1.79
RPH1P39956 RPS13YDR064W 456 nt3.9□□□□□ -1.79
RPH1P39956 CNN1YFR046C 1086 nt3.9□□□□□ -1.79
RPH1P39956 YGL152CYGL152C 678 nt3.9□□□□□ -1.79
RPH1P39956 YIL163CYIL163C 354 nt3.9□□□□□ -1.79
RPH1P39956 SWC7YLR385C 399 nt3.9□□□□□ -1.79
RPH1P39956 GAB1YLR459W 1185 nt3.9□□□□□ -1.79
RPH1P39956 IZH4YOL101C 939 nt3.9□□□□□ -1.79
RPH1P39956 HAT1YPL001W 1125 nt3.9□□□□□ -1.79
RPH1P39956 PRM4YPL156C 855 nt3.9□□□□□ -1.79
RPH1P39956 APA1YCL050C 966 nt3.9□□□□□ -1.79
RPH1P39956 AIP1YMR092C 1848 nt3.9□□□□□ -1.79
RPH1P39956 SRO9YCL037C 1305 nt3.9□□□□□ -1.79
RPH1P39956 UBP6YFR010W 1500 nt3.9□□□□□ -1.79
RPH1P39956 ATG26YLR189C 3597 nt3.89□□□□□ -1.79
RPH1P39956 RDH54YBR073W 2877 nt3.89□□□□□ -1.79
RPH1P39956 DBP5YOR046C 1449 nt3.89□□□□□ -1.79
RPH1P39956 COP1YDL145C 3606 nt3.89□□□□□ -1.79
RPH1P39956 PEX14YGL153W 1026 nt3.89□□□□□ -1.79
RPH1P39956 IGO2YHR132W-A 396 nt3.89□□□□□ -1.79
RPH1P39956 TMA16YOR252W 537 nt3.89□□□□□ -1.79
RPH1P39956 YBR056W-AYBR056W-A 201 nt3.89□□□□□ -1.79
RPH1P39956 CMR3YPR013C 954 nt3.89□□□□□ -1.79
RPH1P39956 YCL001W-AYCL001W-A 462 nt3.89□□□□□ -1.79
RPH1P39956 STP22YCL008C 1158 nt3.89□□□□□ -1.79
RPH1P39956 HSE1YHL002W 1359 nt3.89□□□□□ -1.79
RPH1P39956 TEL1YBL088C 8364 nt3.88□□□□□ -1.79
RPH1P39956 PTA1YAL043C 2358 nt3.88□□□□□ -1.79
RPH1P39956 CWC2YDL209C 1020 nt3.88□□□□□ -1.79
RPH1P39956 HIM1YDR317W 1245 nt3.88□□□□□ -1.79
RPH1P39956 YHR054CYHR054C 1065 nt3.88□□□□□ -1.79
RPH1P39956 YIL102C-AYIL102C-A 228 nt3.88□□□□□ -1.79
RPH1P39956 YJR071WYJR071W 369 nt3.88□□□□□ -1.79
RPH1P39956 YJR096WYJR096W 849 nt3.88□□□□□ -1.79
RPH1P39956 YLR156WYLR156W 345 nt3.88□□□□□ -1.79
RPH1P39956 YLR159WYLR159W 345 nt3.88□□□□□ -1.79
RPH1P39956 YLR161WYLR161W 345 nt3.88□□□□□ -1.79
RPH1P39956 UPS2YLR168C 693 nt3.88□□□□□ -1.79
RPH1P39956 EAF7YNL136W 1278 nt3.88□□□□□ -1.79
RPH1P39956 YNL171CYNL171C 369 nt3.88□□□□□ -1.79
RPH1P39956 RPL18BYNL301C 561 nt3.88□□□□□ -1.79
RPH1P39956 REX4YOL080C 870 nt3.88□□□□□ -1.79
RPH1P39956 SLS1YLR139C 1932 nt3.87□□□□□ -1.79
RPH1P39956 PLP1YDR183W 693 nt3.87□□□□□ -1.79
RPH1P39956 YAL069WYAL069W 315 nt3.87□□□□□ -1.79
RPH1P39956 YLR163W-AYLR163W-A 114 nt3.87□□□□□ -1.79
RPH1P39956 RCE1YMR274C 948 nt3.87□□□□□ -1.79
RPH1P39956 NIS1YNL078W 1224 nt3.87□□□□□ -1.79
RPH1P39956 VPS21YOR089C 633 nt3.87□□□□□ -1.79
RPH1P39956 PBI1YPL272C 1554 nt3.87□□□□□ -1.79
RPH1P39956 BIK1YCL029C 1323 nt3.87□□□□□ -1.79
RPH1P39956 SSL1YLR005W 1386 nt3.87□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 44.1 ms