Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCND1P24385 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCND1P24385 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.78■■□□□ 1.08
CCND1P24385 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCND1P24385 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCND1P24385 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCND1P24385 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.78■■□□□ 1.08
CCND1P24385 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCND1P24385 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.78■■□□□ 1.08
CCND1P24385 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCND1P24385 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCND1P24385 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCND1P24385 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCND1P24385 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCND1P24385 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CCND1P24385 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCND1P24385 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCND1P24385 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.77■■□□□ 1.08
CCND1P24385 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCND1P24385 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCND1P24385 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.77■■□□□ 1.08
CCND1P24385 AL356441.2-201ENST00000443009 864 ntBASIC21.77■■□□□ 1.08
CCND1P24385 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.77■■□□□ 1.08
CCND1P24385 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCND1P24385 AL356740.2-201ENST00000601559 647 ntBASIC21.77■■□□□ 1.08
CCND1P24385 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCND1P24385 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCND1P24385 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCND1P24385 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCND1P24385 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CCND1P24385 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCND1P24385 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCND1P24385 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.76■■□□□ 1.07
CCND1P24385 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCND1P24385 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCND1P24385 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.76■■□□□ 1.07
CCND1P24385 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCND1P24385 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.76■■□□□ 1.07
CCND1P24385 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCND1P24385 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCND1P24385 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCND1P24385 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCND1P24385 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCND1P24385 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CCND1P24385 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.75■■□□□ 1.07
CCND1P24385 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCND1P24385 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCND1P24385 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCND1P24385 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CCND1P24385 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.75■■□□□ 1.07
CCND1P24385 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.75■■□□□ 1.07
CCND1P24385 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.74■■□□□ 1.07
CCND1P24385 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCND1P24385 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.74■■□□□ 1.07
CCND1P24385 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCND1P24385 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCND1P24385 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.74■■□□□ 1.07
CCND1P24385 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCND1P24385 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCND1P24385 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCND1P24385 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
CCND1P24385 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.74■■□□□ 1.07
CCND1P24385 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCND1P24385 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CCND1P24385 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCND1P24385 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCND1P24385 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCND1P24385 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.73■■□□□ 1.07
CCND1P24385 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCND1P24385 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.73■■□□□ 1.07
CCND1P24385 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCND1P24385 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.73■■□□□ 1.07
CCND1P24385 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCND1P24385 MIR3621-201ENST00000580529 85 ntBASIC21.73■■□□□ 1.07
CCND1P24385 AL117332.1-201ENST00000622628 974 ntBASIC21.73■■□□□ 1.07
CCND1P24385 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCND1P24385 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCND1P24385 AC009102.2-201ENST00000606772 1639 ntBASIC21.73■■□□□ 1.07
CCND1P24385 AC144652.1-201ENST00000609974 1624 ntBASIC21.73■■□□□ 1.07
CCND1P24385 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCND1P24385 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCND1P24385 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCND1P24385 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCND1P24385 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCND1P24385 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
CCND1P24385 AC079630.1-202ENST00000618127 1840 ntBASIC21.72■■□□□ 1.07
CCND1P24385 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCND1P24385 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.72■■□□□ 1.07
CCND1P24385 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.72■■□□□ 1.07
CCND1P24385 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCND1P24385 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCND1P24385 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCND1P24385 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCND1P24385 FP325331.1-202ENST00000623531 1380 ntBASIC21.72■■□□□ 1.07
CCND1P24385 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCND1P24385 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.71■■□□□ 1.07
CCND1P24385 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCND1P24385 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCND1P24385 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCND1P24385 AC139530.1-201ENST00000575312 1977 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms