Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
MMP11P24347 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
MMP11P24347 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
MMP11P24347 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP11P24347 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP11P24347 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.65■□□□□ 0.9
MMP11P24347 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.65■□□□□ 0.9
MMP11P24347 AC034268.1-201ENST00000441047 882 ntBASIC20.65■□□□□ 0.9
MMP11P24347 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP11P24347 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.65■□□□□ 0.9
MMP11P24347 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP11P24347 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP11P24347 AL353803.4-201ENST00000565882 1934 ntBASIC20.65■□□□□ 0.9
MMP11P24347 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MMP11P24347 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
MMP11P24347 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
MMP11P24347 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.64■□□□□ 0.89
MMP11P24347 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.64■□□□□ 0.89
MMP11P24347 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MMP11P24347 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
MMP11P24347 AC123595.1-201ENST00000440769 1046 ntBASIC20.64■□□□□ 0.89
MMP11P24347 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MMP11P24347 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.64■□□□□ 0.89
MMP11P24347 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MMP11P24347 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.64■□□□□ 0.89
MMP11P24347 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.64■□□□□ 0.89
MMP11P24347 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.64■□□□□ 0.89
MMP11P24347 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MMP11P24347 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MMP11P24347 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
MMP11P24347 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MMP11P24347 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MMP11P24347 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.63■□□□□ 0.89
MMP11P24347 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP11P24347 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP11P24347 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP11P24347 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.63■□□□□ 0.89
MMP11P24347 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
MMP11P24347 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
MMP11P24347 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.63■□□□□ 0.89
MMP11P24347 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.63■□□□□ 0.89
MMP11P24347 CLDN5-201ENST00000403084 2357 ntBASIC20.63■□□□□ 0.89
MMP11P24347 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.62■□□□□ 0.89
MMP11P24347 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP11P24347 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP11P24347 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.62■□□□□ 0.89
MMP11P24347 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.62■□□□□ 0.89
MMP11P24347 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP11P24347 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.62■□□□□ 0.89
MMP11P24347 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MMP11P24347 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MMP11P24347 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
MMP11P24347 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
MMP11P24347 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.62■□□□□ 0.89
MMP11P24347 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.62■□□□□ 0.89
MMP11P24347 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.62■□□□□ 0.89
MMP11P24347 MIR6084-201ENST00000622012 110 ntBASIC20.62■□□□□ 0.89
MMP11P24347 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MMP11P24347 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MMP11P24347 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.62■□□□□ 0.89
MMP11P24347 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.62■□□□□ 0.89
MMP11P24347 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MMP11P24347 AC004687.1-201ENST00000579003 1625 ntBASIC20.61■□□□□ 0.89
MMP11P24347 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP11P24347 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.61■□□□□ 0.89
MMP11P24347 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MMP11P24347 GUSBP5-202ENST00000510805 1989 ntBASIC20.61■□□□□ 0.89
MMP11P24347 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MMP11P24347 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.6■□□□□ 0.89
MMP11P24347 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP11P24347 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.6■□□□□ 0.89
MMP11P24347 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP11P24347 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP11P24347 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP11P24347 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MMP11P24347 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.6■□□□□ 0.89
MMP11P24347 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.6■□□□□ 0.89
MMP11P24347 AL031602.1-201ENST00000633169 911 ntBASIC20.6■□□□□ 0.89
MMP11P24347 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP11P24347 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP11P24347 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
MMP11P24347 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP11P24347 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MMP11P24347 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MMP11P24347 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.59■□□□□ 0.89
MMP11P24347 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.59■□□□□ 0.89
MMP11P24347 AC068587.7-201ENST00000641602 218 ntBASIC20.59■□□□□ 0.89
MMP11P24347 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP11P24347 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP11P24347 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP11P24347 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
MMP11P24347 LINC00565-201ENST00000562710 2331 ntBASIC20.59■□□□□ 0.89
MMP11P24347 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MMP11P24347 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MMP11P24347 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MMP11P24347 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MMP11P24347 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.58■□□□□ 0.89
MMP11P24347 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.58■□□□□ 0.89
MMP11P24347 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
MMP11P24347 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms