Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC4P09017 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC4P09017 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.36■■□□□ 1.01
HOXC4P09017 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.36■■□□□ 1.01
HOXC4P09017 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
HOXC4P09017 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.36■■□□□ 1.01
HOXC4P09017 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC4P09017 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
HOXC4P09017 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC4P09017 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC4P09017 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.36■■□□□ 1.01
HOXC4P09017 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC4P09017 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC4P09017 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC4P09017 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.35■■□□□ 1.01
HOXC4P09017 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HOXC4P09017 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC4P09017 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.35■■□□□ 1.01
HOXC4P09017 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.35■■□□□ 1.01
HOXC4P09017 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC4P09017 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC4P09017 AC005224.4-201ENST00000583262 1652 ntBASIC21.34■■□□□ 1.01
HOXC4P09017 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC4P09017 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC4P09017 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
HOXC4P09017 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
HOXC4P09017 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
HOXC4P09017 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.34■■□□□ 1.01
HOXC4P09017 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.34■■□□□ 1.01
HOXC4P09017 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.34■■□□□ 1.01
HOXC4P09017 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.34■■□□□ 1.01
HOXC4P09017 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.34■■□□□ 1.01
HOXC4P09017 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.34■■□□□ 1.01
HOXC4P09017 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
HOXC4P09017 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC4P09017 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC4P09017 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC4P09017 AP004607.4-201ENST00000530158 1459 ntBASIC21.33■■□□□ 1.01
HOXC4P09017 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC4P09017 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.33■■□□□ 1.01
HOXC4P09017 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
HOXC4P09017 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.33■■□□□ 1.01
HOXC4P09017 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.33■■□□□ 1.01
HOXC4P09017 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
HOXC4P09017 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.32■■□□□ 1
HOXC4P09017 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.32■■□□□ 1
HOXC4P09017 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.32■■□□□ 1
HOXC4P09017 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.32■■□□□ 1
HOXC4P09017 DUSP8P5-201ENST00000422884 1815 ntBASIC21.32■■□□□ 1
HOXC4P09017 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.32■■□□□ 1
HOXC4P09017 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.32■■□□□ 1
HOXC4P09017 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.32■■□□□ 1
HOXC4P09017 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.32■■□□□ 1
HOXC4P09017 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.32■■□□□ 1
HOXC4P09017 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.32■■□□□ 1
HOXC4P09017 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC4P09017 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HOXC4P09017 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.31■■□□□ 1
HOXC4P09017 OR7E47P-201ENST00000546390 1422 ntBASIC21.31■■□□□ 1
HOXC4P09017 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
HOXC4P09017 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.31■■□□□ 1
HOXC4P09017 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.31■■□□□ 1
HOXC4P09017 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC4P09017 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.31■■□□□ 1
HOXC4P09017 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.31■■□□□ 1
HOXC4P09017 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.31■■□□□ 1
HOXC4P09017 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.31■■□□□ 1
HOXC4P09017 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.31■■□□□ 1
HOXC4P09017 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.31■■□□□ 1
HOXC4P09017 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.31■■□□□ 1
HOXC4P09017 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.31■■□□□ 1
HOXC4P09017 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.31■■□□□ 1
HOXC4P09017 AC087742.1-201ENST00000575880 1738 ntBASIC21.31■■□□□ 1
HOXC4P09017 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.31■■□□□ 1
HOXC4P09017 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC4P09017 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.3■■□□□ 1
HOXC4P09017 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC4P09017 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC4P09017 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.3■■□□□ 1
HOXC4P09017 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC4P09017 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.3■■□□□ 1
HOXC4P09017 AL034346.1-201ENST00000568244 1277 ntBASIC21.3■■□□□ 1
HOXC4P09017 KRT18P61-201ENST00000585825 1298 ntBASIC21.3■■□□□ 1
HOXC4P09017 AC092437.1-201ENST00000624794 1048 ntBASIC21.3■■□□□ 1
HOXC4P09017 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.3■■□□□ 1
HOXC4P09017 LINC00526-201ENST00000581067 1875 ntBASIC21.3■■□□□ 1
HOXC4P09017 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.3■■□□□ 1
HOXC4P09017 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.29■■□□□ 1
HOXC4P09017 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC4P09017 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC4P09017 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.29■■□□□ 1
HOXC4P09017 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC4P09017 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC4P09017 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC4P09017 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC4P09017 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
HOXC4P09017 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.29■■□□□ 1
HOXC4P09017 AC079140.4-201ENST00000507448 529 ntBASIC21.29■■□□□ 1
HOXC4P09017 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC4P09017 AL137784.2-201ENST00000607332 1000 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms