Protein–RNA interactions for Protein: P04942

Ig kappa chain V-VI region NQ5-61.1.2, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04942 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04942 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04942 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
P04942 Gm8493-201ENSMUST00000196881 489 ntBASIC15.52■□□□□ 0.08
P04942 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.52■□□□□ 0.08
P04942 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
P04942 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04942 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
P04942 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
P04942 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
P04942 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
P04942 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
P04942 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
P04942 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04942 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
P04942 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.51■□□□□ 0.07
P04942 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
P04942 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.51■□□□□ 0.07
P04942 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.51■□□□□ 0.07
P04942 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
P04942 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
P04942 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
P04942 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04942 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04942 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
P04942 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04942 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04942 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
P04942 Gm11421-201ENSMUST00000122124 294 ntBASIC15.5■□□□□ 0.07
P04942 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04942 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
P04942 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
P04942 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04942 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04942 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04942 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04942 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04942 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04942 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04942 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
P04942 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04942 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04942 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04942 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04942 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
P04942 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04942 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
P04942 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.49■□□□□ 0.07
P04942 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04942 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04942 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04942 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
P04942 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
P04942 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04942 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.48■□□□□ 0.07
P04942 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04942 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04942 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
P04942 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.48■□□□□ 0.07
P04942 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
P04942 Gm6139-201ENSMUST00000079261 882 ntBASIC15.48■□□□□ 0.07
P04942 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
P04942 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04942 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
P04942 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.48■□□□□ 0.07
P04942 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
P04942 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
P04942 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
P04942 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.47■□□□□ 0.07
P04942 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
P04942 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
P04942 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
P04942 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
P04942 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
P04942 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
P04942 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.47■□□□□ 0.07
P04942 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
P04942 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
P04942 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
P04942 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
P04942 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
P04942 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
P04942 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
P04942 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
P04942 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
P04942 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
P04942 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
P04942 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
P04942 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.46■□□□□ 0.07
P04942 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
P04942 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.46■□□□□ 0.07
P04942 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
P04942 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
P04942 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
P04942 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
P04942 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
P04942 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04942 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04942 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04942 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms