Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ESRRAP1-201ENST00000400596 1257 ntBASIC22.17■■□□□ 1.14
PDGFBP01127 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.17■■□□□ 1.14
PDGFBP01127 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDGFBP01127 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDGFBP01127 AC010536.3-201ENST00000620306 533 ntBASIC22.17■■□□□ 1.14
PDGFBP01127 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
PDGFBP01127 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.17■■□□□ 1.14
PDGFBP01127 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDGFBP01127 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDGFBP01127 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDGFBP01127 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDGFBP01127 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDGFBP01127 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDGFBP01127 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.16■■□□□ 1.14
PDGFBP01127 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.16■■□□□ 1.14
PDGFBP01127 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PDGFBP01127 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PDGFBP01127 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.16■■□□□ 1.14
PDGFBP01127 AC142381.4-202ENST00000563973 229 ntBASIC22.16■■□□□ 1.14
PDGFBP01127 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDGFBP01127 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PDGFBP01127 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDGFBP01127 MKRN4P-201ENST00000444706 1521 ntBASIC22.16■■□□□ 1.14
PDGFBP01127 OXCT2P1-201ENST00000447263 1535 ntBASIC22.16■■□□□ 1.14
PDGFBP01127 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDGFBP01127 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDGFBP01127 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDGFBP01127 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.15■■□□□ 1.14
PDGFBP01127 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDGFBP01127 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PDGFBP01127 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDGFBP01127 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.15■■□□□ 1.14
PDGFBP01127 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.15■■□□□ 1.14
PDGFBP01127 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PDGFBP01127 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PDGFBP01127 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PDGFBP01127 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.15■■□□□ 1.14
PDGFBP01127 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PDGFBP01127 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PDGFBP01127 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PDGFBP01127 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.14■■□□□ 1.13
PDGFBP01127 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PDGFBP01127 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
PDGFBP01127 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
PDGFBP01127 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDGFBP01127 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PDGFBP01127 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDGFBP01127 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDGFBP01127 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.14■■□□□ 1.13
PDGFBP01127 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDGFBP01127 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PDGFBP01127 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.13■■□□□ 1.13
PDGFBP01127 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PDGFBP01127 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.13■■□□□ 1.13
PDGFBP01127 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PDGFBP01127 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDGFBP01127 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.13■■□□□ 1.13
PDGFBP01127 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.13■■□□□ 1.13
PDGFBP01127 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDGFBP01127 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PDGFBP01127 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PDGFBP01127 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.12■■□□□ 1.13
PDGFBP01127 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDGFBP01127 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDGFBP01127 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDGFBP01127 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.12■■□□□ 1.13
PDGFBP01127 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDGFBP01127 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDGFBP01127 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.12■■□□□ 1.13
PDGFBP01127 CYP2T1P-201ENST00000432607 1285 ntBASIC22.12■■□□□ 1.13
PDGFBP01127 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.12■■□□□ 1.13
PDGFBP01127 AC006058.3-201ENST00000606217 1069 ntBASIC22.12■■□□□ 1.13
PDGFBP01127 AC083880.1-201ENST00000608266 535 ntBASIC22.12■■□□□ 1.13
PDGFBP01127 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.12■■□□□ 1.13
PDGFBP01127 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDGFBP01127 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDGFBP01127 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDGFBP01127 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.11■■□□□ 1.13
PDGFBP01127 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.11■■□□□ 1.13
PDGFBP01127 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.11■■□□□ 1.13
PDGFBP01127 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.11■■□□□ 1.13
PDGFBP01127 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDGFBP01127 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDGFBP01127 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PDGFBP01127 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PDGFBP01127 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDGFBP01127 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PDGFBP01127 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDGFBP01127 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.1■■□□□ 1.13
PDGFBP01127 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.1■■□□□ 1.13
PDGFBP01127 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.1■■□□□ 1.13
PDGFBP01127 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.1■■□□□ 1.13
PDGFBP01127 AC128676.1-201ENST00000454392 318 ntBASIC22.1■■□□□ 1.13
PDGFBP01127 AC092118.2-201ENST00000613495 667 ntBASIC22.1■■□□□ 1.13
PDGFBP01127 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDGFBP01127 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDGFBP01127 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.09■■□□□ 1.13
PDGFBP01127 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDGFBP01127 AC068338.2-201ENST00000563278 1430 ntBASIC22.09■■□□□ 1.13
PDGFBP01127 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms