Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT3O75175 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CNOT3O75175 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT3O75175 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CNOT3O75175 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.95■□□□□ 0.94
CNOT3O75175 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT3O75175 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT3O75175 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT3O75175 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.94
CNOT3O75175 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.95■□□□□ 0.94
CNOT3O75175 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.95■□□□□ 0.94
CNOT3O75175 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT3O75175 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.95■□□□□ 0.94
CNOT3O75175 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.95■□□□□ 0.94
CNOT3O75175 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CNOT3O75175 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.95■□□□□ 0.94
CNOT3O75175 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT3O75175 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT3O75175 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT3O75175 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT3O75175 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CNOT3O75175 LINC01529-204ENST00000636474 1715 ntBASIC20.95■□□□□ 0.94
CNOT3O75175 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT3O75175 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT3O75175 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT3O75175 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT3O75175 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT3O75175 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.94■□□□□ 0.94
CNOT3O75175 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CNOT3O75175 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.94■□□□□ 0.94
CNOT3O75175 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.94■□□□□ 0.94
CNOT3O75175 AC126544.1-201ENST00000580842 1059 ntBASIC20.94■□□□□ 0.94
CNOT3O75175 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT3O75175 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.94■□□□□ 0.94
CNOT3O75175 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT3O75175 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT3O75175 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT3O75175 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT3O75175 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.93■□□□□ 0.94
CNOT3O75175 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT3O75175 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT3O75175 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.93■□□□□ 0.94
CNOT3O75175 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.93■□□□□ 0.94
CNOT3O75175 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT3O75175 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CNOT3O75175 MIR6821-201ENST00000617625 74 ntBASIC20.93■□□□□ 0.94
CNOT3O75175 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.93■□□□□ 0.94
CNOT3O75175 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CNOT3O75175 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.93■□□□□ 0.94
CNOT3O75175 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT3O75175 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CNOT3O75175 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT3O75175 AC233723.2-201ENST00000623798 2106 ntBASIC20.93■□□□□ 0.94
CNOT3O75175 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CNOT3O75175 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.93■□□□□ 0.94
CNOT3O75175 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT3O75175 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT3O75175 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT3O75175 AC079630.1-202ENST00000618127 1840 ntBASIC20.92■□□□□ 0.94
CNOT3O75175 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT3O75175 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.92■□□□□ 0.94
CNOT3O75175 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT3O75175 AC087623.3-201ENST00000607047 1098 ntBASIC20.92■□□□□ 0.94
CNOT3O75175 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT3O75175 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT3O75175 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT3O75175 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT3O75175 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT3O75175 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT3O75175 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CNOT3O75175 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.91■□□□□ 0.94
CNOT3O75175 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT3O75175 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.91■□□□□ 0.94
CNOT3O75175 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CNOT3O75175 AC097381.1-201ENST00000429019 1296 ntBASIC20.91■□□□□ 0.94
CNOT3O75175 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.91■□□□□ 0.94
CNOT3O75175 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.91■□□□□ 0.94
CNOT3O75175 TSPY26P-201ENST00000476365 1326 ntBASIC20.91■□□□□ 0.94
CNOT3O75175 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.91■□□□□ 0.94
CNOT3O75175 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CNOT3O75175 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
CNOT3O75175 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.91■□□□□ 0.94
CNOT3O75175 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CNOT3O75175 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT3O75175 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT3O75175 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT3O75175 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT3O75175 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.9■□□□□ 0.94
CNOT3O75175 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT3O75175 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.9■□□□□ 0.94
CNOT3O75175 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT3O75175 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CNOT3O75175 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT3O75175 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.9■□□□□ 0.94
CNOT3O75175 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT3O75175 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.9■□□□□ 0.94
CNOT3O75175 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.9■□□□□ 0.94
CNOT3O75175 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT3O75175 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT3O75175 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms