Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC010542.4-201ENST00000563151 1910 ntBASIC21.61■■□□□ 1.05
PHGDHO43175 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PHGDHO43175 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
PHGDHO43175 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PHGDHO43175 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PHGDHO43175 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PHGDHO43175 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.61■■□□□ 1.05
PHGDHO43175 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PHGDHO43175 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.61■■□□□ 1.05
PHGDHO43175 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PHGDHO43175 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.61■■□□□ 1.05
PHGDHO43175 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PHGDHO43175 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PHGDHO43175 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.6■■□□□ 1.05
PHGDHO43175 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PHGDHO43175 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PHGDHO43175 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PHGDHO43175 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PHGDHO43175 GUSBP5-201ENST00000418136 578 ntBASIC21.6■■□□□ 1.05
PHGDHO43175 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PHGDHO43175 AC241377.3-202ENST00000626088 1088 ntBASIC21.6■■□□□ 1.05
PHGDHO43175 AC241585.3-202ENST00000628937 1088 ntBASIC21.6■■□□□ 1.05
PHGDHO43175 AC245100.8-202ENST00000629247 1058 ntBASIC21.6■■□□□ 1.05
PHGDHO43175 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PHGDHO43175 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.6■■□□□ 1.05
PHGDHO43175 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.6■■□□□ 1.05
PHGDHO43175 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PHGDHO43175 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PHGDHO43175 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.59■■□□□ 1.05
PHGDHO43175 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.59■■□□□ 1.05
PHGDHO43175 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PHGDHO43175 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
PHGDHO43175 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PHGDHO43175 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PHGDHO43175 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.59■■□□□ 1.05
PHGDHO43175 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.59■■□□□ 1.05
PHGDHO43175 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PHGDHO43175 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PHGDHO43175 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PHGDHO43175 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.58■■□□□ 1.05
PHGDHO43175 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PHGDHO43175 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
PHGDHO43175 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PHGDHO43175 FAM99A-202ENST00000538190 1989 ntBASIC21.58■■□□□ 1.05
PHGDHO43175 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
PHGDHO43175 pRNA.6-201ENST00000610482 90 ntBASIC21.58■■□□□ 1.05
PHGDHO43175 pRNA.5-201ENST00000612139 90 ntBASIC21.58■■□□□ 1.05
PHGDHO43175 pRNA.11-201ENST00000618423 90 ntBASIC21.58■■□□□ 1.05
PHGDHO43175 pRNA.13-201ENST00000619112 90 ntBASIC21.58■■□□□ 1.05
PHGDHO43175 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PHGDHO43175 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PHGDHO43175 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.58■■□□□ 1.04
PHGDHO43175 PKD1P6-201ENST00000343738 4769 ntBASIC21.58■■□□□ 1.04
PHGDHO43175 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PHGDHO43175 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.58■■□□□ 1.04
PHGDHO43175 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PHGDHO43175 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.57■■□□□ 1.04
PHGDHO43175 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.57■■□□□ 1.04
PHGDHO43175 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PHGDHO43175 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
PHGDHO43175 AC133637.1-201ENST00000624115 1537 ntBASIC21.57■■□□□ 1.04
PHGDHO43175 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PHGDHO43175 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.57■■□□□ 1.04
PHGDHO43175 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.57■■□□□ 1.04
PHGDHO43175 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.57■■□□□ 1.04
PHGDHO43175 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.57■■□□□ 1.04
PHGDHO43175 AC099791.2-201ENST00000605725 427 ntBASIC21.57■■□□□ 1.04
PHGDHO43175 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.57■■□□□ 1.04
PHGDHO43175 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
PHGDHO43175 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
PHGDHO43175 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PHGDHO43175 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PHGDHO43175 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PHGDHO43175 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PHGDHO43175 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PHGDHO43175 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.56■■□□□ 1.04
PHGDHO43175 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHGDHO43175 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.56■■□□□ 1.04
PHGDHO43175 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.56■■□□□ 1.04
PHGDHO43175 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
PHGDHO43175 AL356740.2-201ENST00000601559 647 ntBASIC21.56■■□□□ 1.04
PHGDHO43175 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.56■■□□□ 1.04
PHGDHO43175 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHGDHO43175 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.56■■□□□ 1.04
PHGDHO43175 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.56■■□□□ 1.04
PHGDHO43175 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.56■■□□□ 1.04
PHGDHO43175 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHGDHO43175 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHGDHO43175 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHGDHO43175 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHGDHO43175 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.55■■□□□ 1.04
PHGDHO43175 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.55■■□□□ 1.04
PHGDHO43175 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PHGDHO43175 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHGDHO43175 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHGDHO43175 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.55■■□□□ 1.04
PHGDHO43175 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PHGDHO43175 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHGDHO43175 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHGDHO43175 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms