Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPTLC1O15269 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPTLC1O15269 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.33■■□□□ 1.33
SPTLC1O15269 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPTLC1O15269 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.33■■□□□ 1.33
SPTLC1O15269 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.33■■□□□ 1.33
SPTLC1O15269 CCDC92B-201ENST00000575506 885 ntBASIC23.33■■□□□ 1.33
SPTLC1O15269 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SPTLC1O15269 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SPTLC1O15269 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SPTLC1O15269 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SPTLC1O15269 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SPTLC1O15269 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
SPTLC1O15269 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SPTLC1O15269 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.32■■□□□ 1.32
SPTLC1O15269 AL137784.2-201ENST00000607332 1000 ntBASIC23.32■■□□□ 1.32
SPTLC1O15269 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SPTLC1O15269 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.32■■□□□ 1.32
SPTLC1O15269 AC087742.1-201ENST00000575880 1738 ntBASIC23.32■■□□□ 1.32
SPTLC1O15269 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SPTLC1O15269 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SPTLC1O15269 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
SPTLC1O15269 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
SPTLC1O15269 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SPTLC1O15269 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SPTLC1O15269 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
SPTLC1O15269 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.31■■□□□ 1.32
SPTLC1O15269 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SPTLC1O15269 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.31■■□□□ 1.32
SPTLC1O15269 TERF1P2-201ENST00000583350 1212 ntBASIC23.31■■□□□ 1.32
SPTLC1O15269 TPRG1LP1-201ENST00000598702 760 ntBASIC23.31■■□□□ 1.32
SPTLC1O15269 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
SPTLC1O15269 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SPTLC1O15269 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SPTLC1O15269 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.31■■□□□ 1.32
SPTLC1O15269 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPTLC1O15269 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
SPTLC1O15269 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SPTLC1O15269 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SPTLC1O15269 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.3■■□□□ 1.32
SPTLC1O15269 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPTLC1O15269 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
SPTLC1O15269 AC034268.1-201ENST00000441047 882 ntBASIC23.3■■□□□ 1.32
SPTLC1O15269 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.3■■□□□ 1.32
SPTLC1O15269 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.3■■□□□ 1.32
SPTLC1O15269 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SPTLC1O15269 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SPTLC1O15269 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.3■■□□□ 1.32
SPTLC1O15269 LINC02228-203ENST00000641970 1355 ntBASIC23.29■■□□□ 1.32
SPTLC1O15269 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.29■■□□□ 1.32
SPTLC1O15269 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SPTLC1O15269 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SPTLC1O15269 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.29■■□□□ 1.32
SPTLC1O15269 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.29■■□□□ 1.32
SPTLC1O15269 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPTLC1O15269 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SPTLC1O15269 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPTLC1O15269 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPTLC1O15269 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPTLC1O15269 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.28■■□□□ 1.32
SPTLC1O15269 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.28■■□□□ 1.32
SPTLC1O15269 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.28■■□□□ 1.32
SPTLC1O15269 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.28■■□□□ 1.32
SPTLC1O15269 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPTLC1O15269 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPTLC1O15269 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPTLC1O15269 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPTLC1O15269 BX005040.4-201ENST00000637145 1518 ntBASIC23.28■■□□□ 1.32
SPTLC1O15269 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPTLC1O15269 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.28■■□□□ 1.32
SPTLC1O15269 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
SPTLC1O15269 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.27■■□□□ 1.32
SPTLC1O15269 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.27■■□□□ 1.32
SPTLC1O15269 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPTLC1O15269 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SPTLC1O15269 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.27■■□□□ 1.32
SPTLC1O15269 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPTLC1O15269 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPTLC1O15269 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPTLC1O15269 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPTLC1O15269 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
SPTLC1O15269 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPTLC1O15269 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SPTLC1O15269 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPTLC1O15269 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.26■■□□□ 1.31
SPTLC1O15269 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.26■■□□□ 1.31
SPTLC1O15269 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.26■■□□□ 1.31
SPTLC1O15269 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.26■■□□□ 1.31
SPTLC1O15269 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SPTLC1O15269 AC079089.2-201ENST00000531211 1277 ntBASIC23.26■■□□□ 1.31
SPTLC1O15269 KRT18P14-201ENST00000534205 1250 ntBASIC23.26■■□□□ 1.31
SPTLC1O15269 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.26■■□□□ 1.31
SPTLC1O15269 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SPTLC1O15269 AC022517.1-201ENST00000592429 346 ntBASIC23.26■■□□□ 1.31
SPTLC1O15269 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.26■■□□□ 1.31
SPTLC1O15269 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPTLC1O15269 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SPTLC1O15269 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SPTLC1O15269 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SPTLC1O15269 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms