Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC103834.1-201ENST00000520383 144 ntBASIC16.88■□□□□ 0.29
TRAV5A0A0B4J249 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV5A0A0B4J249 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV5A0A0B4J249 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 SLC25A24-204ENST00000569674 2357 ntBASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 AC009086.3-201ENST00000623486 1008 ntBASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 AC005703.6-201ENST00000623265 1329 ntBASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRAV5A0A0B4J249 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 AC004687.1-201ENST00000579003 1625 ntBASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV5A0A0B4J249 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV5A0A0B4J249 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV5A0A0B4J249 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV5A0A0B4J249 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV5A0A0B4J249 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV5A0A0B4J249 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV5A0A0B4J249 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV5A0A0B4J249 AC103724.3-201ENST00000564481 992 ntBASIC16.85■□□□□ 0.29
TRAV5A0A0B4J249 DUX4L4-201ENST00000566884 1269 ntBASIC16.85■□□□□ 0.29
TRAV5A0A0B4J249 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRAV5A0A0B4J249 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV5A0A0B4J249 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TRAV5A0A0B4J249 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV5A0A0B4J249 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 AC137630.3-201ENST00000607245 391 ntBASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV5A0A0B4J249 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV5A0A0B4J249 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV5A0A0B4J249 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV5A0A0B4J249 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 AC244015.2-201ENST00000616358 1861 ntBASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRAV5A0A0B4J249 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV5A0A0B4J249 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms