Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 AL035685.1-201ENST00000636663 812 ntBASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV8-2A0A0B4J237 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 KRT16P3-201ENST00000439127 1283 ntBASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 CA15P2-201ENST00000611168 834 ntBASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV8-2A0A0B4J237 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-2A0A0B4J237 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV8-2A0A0B4J237 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV8-2A0A0B4J237 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV8-2A0A0B4J237 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-2A0A0B4J237 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-2A0A0B4J237 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV8-2A0A0B4J237 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-2A0A0B4J237 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TRAV8-2A0A0B4J237 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-2A0A0B4J237 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-2A0A0B4J237 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-2A0A0B4J237 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV8-2A0A0B4J237 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRAV8-2A0A0B4J237 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV8-2A0A0B4J237 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 AC241377.3-202ENST00000626088 1088 ntBASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 AC241585.3-202ENST00000628937 1088 ntBASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 AC245100.8-202ENST00000629247 1058 ntBASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 AC007375.3-201ENST00000600936 2314 ntBASIC16.46■□□□□ 0.23
TRAV8-2A0A0B4J237 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
TRAV8-2A0A0B4J237 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV8-2A0A0B4J237 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV8-2A0A0B4J237 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms