Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 PKP4P1-201ENST00000426801 2158 ntBASIC13.3□□□□□ -0.28
SLC1A1P43005 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 FAM230B-205ENST00000424410 1856 ntTSL 5 BASIC13.3□□□□□ -0.28
SLC1A1P43005 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 AC034238.1-214ENST00000609699 1590 ntTSL 5 BASIC13.3□□□□□ -0.28
SLC1A1P43005 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 PTPN6-201ENST00000318974 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 NHP2-202ENST00000314397 599 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SLC1A1P43005 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC13.3□□□□□ -0.28
SLC1A1P43005 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SLC1A1P43005 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.3□□□□□ -0.28
SLC1A1P43005 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC13.3□□□□□ -0.28
SLC1A1P43005 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.3□□□□□ -0.28
SLC1A1P43005 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC13.3□□□□□ -0.28
SLC1A1P43005 NBN-203ENST00000409330 4523 ntTSL 5 BASIC13.3□□□□□ -0.28
SLC1A1P43005 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 AC026271.1-201ENST00000447794 1348 ntBASIC13.3□□□□□ -0.28
SLC1A1P43005 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 ORC6-204ENST00000566860 1699 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SLC1A1P43005 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SLC1A1P43005 GOLGA2P1-201ENST00000512938 2906 ntBASIC13.29□□□□□ -0.28
SLC1A1P43005 MORN4-203ENST00000478953 2225 ntTSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 TAS1R1-202ENST00000351136 1871 ntTSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 MRPL24-201ENST00000361531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 FMO6P-202ENST00000367754 2130 ntTSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 KRT18P33-201ENST00000398525 1043 ntBASIC13.29□□□□□ -0.28
SLC1A1P43005 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 ZFR2-203ENST00000439086 870 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 VDAC1P13-201ENST00000447826 859 ntBASIC13.29□□□□□ -0.28
SLC1A1P43005 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.29□□□□□ -0.28
SLC1A1P43005 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.29□□□□□ -0.28
SLC1A1P43005 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC13.29□□□□□ -0.28
SLC1A1P43005 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC13.29□□□□□ -0.28
SLC1A1P43005 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.29□□□□□ -0.28
SLC1A1P43005 AC133555.4-201ENST00000569081 152 ntBASIC13.29□□□□□ -0.28
SLC1A1P43005 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 MIR5196-201ENST00000578146 115 ntBASIC13.29□□□□□ -0.28
SLC1A1P43005 AC239600.1-201ENST00000603201 462 ntBASIC13.29□□□□□ -0.28
SLC1A1P43005 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC13.29□□□□□ -0.28
SLC1A1P43005 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 ARHGEF9-221ENST00000635967 2179 ntTSL 5 BASIC13.29□□□□□ -0.28
SLC1A1P43005 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 CD300LF-202ENST00000326165 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 CCDC129-201ENST00000319386 4544 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 TNIP1-218ENST00000523338 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 TP53TG3F-201ENST00000617705 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 EEF1AKMT3-202ENST00000333012 2762 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 CLCN6-206ENST00000376496 2922 ntTSL 5 BASIC13.29□□□□□ -0.28
SLC1A1P43005 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
SLC1A1P43005 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLC1A1P43005 ZNF436-AS1-201ENST00000335648 2547 ntBASIC13.29□□□□□ -0.28
SLC1A1P43005 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC13.29□□□□□ -0.28
SLC1A1P43005 LONP2-203ENST00000535754 2580 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SLC1A1P43005 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SLC1A1P43005 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SLC1A1P43005 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 ZNF542P-207ENST00000495307 3393 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 AR-202ENST00000396043 1728 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 PTPN11-205ENST00000635625 1794 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
SLC1A1P43005 CASP7-203ENST00000369318 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 BEST3-201ENST00000266661 1876 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms