Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.9■■□□□ 1.9
TNFRSF11AQ9Y6Q6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.9■■□□□ 1.9
TNFRSF11AQ9Y6Q6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.89■■□□□ 1.9
TNFRSF11AQ9Y6Q6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.89■■□□□ 1.9
TNFRSF11AQ9Y6Q6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.89■■□□□ 1.9
TNFRSF11AQ9Y6Q6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.89■■□□□ 1.9
TNFRSF11AQ9Y6Q6 AC087623.3-201ENST00000607047 1098 ntBASIC26.89■■□□□ 1.9
TNFRSF11AQ9Y6Q6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
TNFRSF11AQ9Y6Q6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.89
TNFRSF11AQ9Y6Q6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
TNFRSF11AQ9Y6Q6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.89
TNFRSF11AQ9Y6Q6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
TNFRSF11AQ9Y6Q6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.89■■□□□ 1.89
TNFRSF11AQ9Y6Q6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
TNFRSF11AQ9Y6Q6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TNFRSF11AQ9Y6Q6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
TNFRSF11AQ9Y6Q6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.88■■□□□ 1.89
TNFRSF11AQ9Y6Q6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
TNFRSF11AQ9Y6Q6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
TNFRSF11AQ9Y6Q6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TNFRSF11AQ9Y6Q6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TNFRSF11AQ9Y6Q6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TNFRSF11AQ9Y6Q6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TNFRSF11AQ9Y6Q6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.87■■□□□ 1.89
TNFRSF11AQ9Y6Q6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.87■■□□□ 1.89
TNFRSF11AQ9Y6Q6 AC012414.1-201ENST00000556676 535 ntBASIC26.87■■□□□ 1.89
TNFRSF11AQ9Y6Q6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
TNFRSF11AQ9Y6Q6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TNFRSF11AQ9Y6Q6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.87■■□□□ 1.89
TNFRSF11AQ9Y6Q6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.86■■□□□ 1.89
TNFRSF11AQ9Y6Q6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.86■■□□□ 1.89
TNFRSF11AQ9Y6Q6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TNFRSF11AQ9Y6Q6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TNFRSF11AQ9Y6Q6 AC010141.3-201ENST00000456659 717 ntBASIC26.86■■□□□ 1.89
TNFRSF11AQ9Y6Q6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.86■■□□□ 1.89
TNFRSF11AQ9Y6Q6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
TNFRSF11AQ9Y6Q6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
TNFRSF11AQ9Y6Q6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
TNFRSF11AQ9Y6Q6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
TNFRSF11AQ9Y6Q6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TNFRSF11AQ9Y6Q6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TNFRSF11AQ9Y6Q6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TNFRSF11AQ9Y6Q6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TNFRSF11AQ9Y6Q6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
TNFRSF11AQ9Y6Q6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TNFRSF11AQ9Y6Q6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.85■■□□□ 1.89
TNFRSF11AQ9Y6Q6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TNFRSF11AQ9Y6Q6 SMUG1P1-201ENST00000590640 811 ntBASIC26.85■■□□□ 1.89
TNFRSF11AQ9Y6Q6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TNFRSF11AQ9Y6Q6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.85■■□□□ 1.89
TNFRSF11AQ9Y6Q6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TNFRSF11AQ9Y6Q6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TNFRSF11AQ9Y6Q6 MIR6821-201ENST00000617625 74 ntBASIC26.84■■□□□ 1.89
TNFRSF11AQ9Y6Q6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.84■■□□□ 1.89
TNFRSF11AQ9Y6Q6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TNFRSF11AQ9Y6Q6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TNFRSF11AQ9Y6Q6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TNFRSF11AQ9Y6Q6 AC068473.5-201ENST00000616428 2072 ntBASIC26.84■■□□□ 1.89
TNFRSF11AQ9Y6Q6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TNFRSF11AQ9Y6Q6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.84■■□□□ 1.89
TNFRSF11AQ9Y6Q6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.84■■□□□ 1.89
TNFRSF11AQ9Y6Q6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
TNFRSF11AQ9Y6Q6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.83■■□□□ 1.89
TNFRSF11AQ9Y6Q6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
TNFRSF11AQ9Y6Q6 AC137767.1-201ENST00000602918 1920 ntBASIC26.83■■□□□ 1.89
TNFRSF11AQ9Y6Q6 AC097381.1-201ENST00000429019 1296 ntBASIC26.83■■□□□ 1.89
TNFRSF11AQ9Y6Q6 OXCT2P1-201ENST00000447263 1535 ntBASIC26.83■■□□□ 1.89
TNFRSF11AQ9Y6Q6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TNFRSF11AQ9Y6Q6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TNFRSF11AQ9Y6Q6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TNFRSF11AQ9Y6Q6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TNFRSF11AQ9Y6Q6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.82■■□□□ 1.88
TNFRSF11AQ9Y6Q6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TNFRSF11AQ9Y6Q6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TNFRSF11AQ9Y6Q6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.82■■□□□ 1.88
TNFRSF11AQ9Y6Q6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TNFRSF11AQ9Y6Q6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.82■■□□□ 1.88
TNFRSF11AQ9Y6Q6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.82■■□□□ 1.88
TNFRSF11AQ9Y6Q6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.82■■□□□ 1.88
TNFRSF11AQ9Y6Q6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TNFRSF11AQ9Y6Q6 AC105233.4-201ENST00000642045 216 ntBASIC26.82■■□□□ 1.88
TNFRSF11AQ9Y6Q6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TNFRSF11AQ9Y6Q6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TNFRSF11AQ9Y6Q6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TNFRSF11AQ9Y6Q6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.81■■□□□ 1.88
TNFRSF11AQ9Y6Q6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TNFRSF11AQ9Y6Q6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.81■■□□□ 1.88
TNFRSF11AQ9Y6Q6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
TNFRSF11AQ9Y6Q6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TNFRSF11AQ9Y6Q6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
TNFRSF11AQ9Y6Q6 LINC00526-201ENST00000581067 1875 ntBASIC26.81■■□□□ 1.88
TNFRSF11AQ9Y6Q6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TNFRSF11AQ9Y6Q6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TNFRSF11AQ9Y6Q6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
TNFRSF11AQ9Y6Q6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
TNFRSF11AQ9Y6Q6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TNFRSF11AQ9Y6Q6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.8■■□□□ 1.88
TNFRSF11AQ9Y6Q6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.8■■□□□ 1.88
TNFRSF11AQ9Y6Q6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.8■■□□□ 1.88
TNFRSF11AQ9Y6Q6 AC068587.7-201ENST00000641602 218 ntBASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms