Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PTCH2Q9Y6C5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.95■■□□□ 1.58
PTCH2Q9Y6C5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
PTCH2Q9Y6C5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PTCH2Q9Y6C5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCH2Q9Y6C5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.94■■□□□ 1.58
PTCH2Q9Y6C5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCH2Q9Y6C5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
PTCH2Q9Y6C5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
PTCH2Q9Y6C5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
PTCH2Q9Y6C5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PTCH2Q9Y6C5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PTCH2Q9Y6C5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.93■■□□□ 1.58
PTCH2Q9Y6C5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PTCH2Q9Y6C5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PTCH2Q9Y6C5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PTCH2Q9Y6C5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC24.93■■□□□ 1.58
PTCH2Q9Y6C5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.93■■□□□ 1.58
PTCH2Q9Y6C5 AC068587.7-201ENST00000641602 218 ntBASIC24.93■■□□□ 1.58
PTCH2Q9Y6C5 MYCNOS-205ENST00000641950 531 ntBASIC24.93■■□□□ 1.58
PTCH2Q9Y6C5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
PTCH2Q9Y6C5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PTCH2Q9Y6C5 KRT87P-202ENST00000534226 1464 ntBASIC24.92■■□□□ 1.58
PTCH2Q9Y6C5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PTCH2Q9Y6C5 CNN2P6-201ENST00000439038 900 ntBASIC24.92■■□□□ 1.58
PTCH2Q9Y6C5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC24.92■■□□□ 1.58
PTCH2Q9Y6C5 AC010141.3-201ENST00000456659 717 ntBASIC24.92■■□□□ 1.58
PTCH2Q9Y6C5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PTCH2Q9Y6C5 AC133552.2-202ENST00000575694 574 ntBASIC24.92■■□□□ 1.58
PTCH2Q9Y6C5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.92■■□□□ 1.58
PTCH2Q9Y6C5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
PTCH2Q9Y6C5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PTCH2Q9Y6C5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.91■■□□□ 1.58
PTCH2Q9Y6C5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.91■■□□□ 1.58
PTCH2Q9Y6C5 AC098590.1-201ENST00000468126 897 ntBASIC24.91■■□□□ 1.58
PTCH2Q9Y6C5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PTCH2Q9Y6C5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
PTCH2Q9Y6C5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PTCH2Q9Y6C5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.91■■□□□ 1.58
PTCH2Q9Y6C5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PTCH2Q9Y6C5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PTCH2Q9Y6C5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
PTCH2Q9Y6C5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PTCH2Q9Y6C5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.9■■□□□ 1.58
PTCH2Q9Y6C5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PTCH2Q9Y6C5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.9■■□□□ 1.58
PTCH2Q9Y6C5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.9■■□□□ 1.58
PTCH2Q9Y6C5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
PTCH2Q9Y6C5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.9■■□□□ 1.58
PTCH2Q9Y6C5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
PTCH2Q9Y6C5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
PTCH2Q9Y6C5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PTCH2Q9Y6C5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.89■■□□□ 1.58
PTCH2Q9Y6C5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PTCH2Q9Y6C5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PTCH2Q9Y6C5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PTCH2Q9Y6C5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PTCH2Q9Y6C5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PTCH2Q9Y6C5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.89■■□□□ 1.58
PTCH2Q9Y6C5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.89■■□□□ 1.57
PTCH2Q9Y6C5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PTCH2Q9Y6C5 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.88■■□□□ 1.57
PTCH2Q9Y6C5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCH2Q9Y6C5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCH2Q9Y6C5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCH2Q9Y6C5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
PTCH2Q9Y6C5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCH2Q9Y6C5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC24.88■■□□□ 1.57
PTCH2Q9Y6C5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCH2Q9Y6C5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PTCH2Q9Y6C5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PTCH2Q9Y6C5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCH2Q9Y6C5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCH2Q9Y6C5 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.87■■□□□ 1.57
PTCH2Q9Y6C5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PTCH2Q9Y6C5 SLC7A5P1-201ENST00000568957 537 ntBASIC24.87■■□□□ 1.57
PTCH2Q9Y6C5 MIR4758-201ENST00000577688 71 ntBASIC24.87■■□□□ 1.57
PTCH2Q9Y6C5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PTCH2Q9Y6C5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 AC004687.1-201ENST00000579003 1625 ntBASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 DUSP5P2-201ENST00000426873 1033 ntBASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 AP006294.2-201ENST00000641667 209 ntBASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCH2Q9Y6C5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.85■■□□□ 1.57
PTCH2Q9Y6C5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.85■■□□□ 1.57
PTCH2Q9Y6C5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.85■■□□□ 1.57
PTCH2Q9Y6C5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCH2Q9Y6C5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.85■■□□□ 1.57
PTCH2Q9Y6C5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCH2Q9Y6C5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms